Transcript Information: S_Transcript_363777.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.082906545903989
Replicate 20.1374628632867
Replicate 30.22981602596387
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.066404509672839
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_363777.p1 GENE.S_Transcript_363777~~S_Transcript_363777.p1 ORF type:5prime_partial len:321 (-),score=34.48,rve|PF00665.22|9.3e-17,gag_pre-integrs|PF13976.2|7.6e-07 S_Transcript_363777:180-1142(-)
ATTCCGAACTTTAAATACAACTTACTGTCTGTTGCCAAGTTGTCTGAACAACTTCAATGTTCTGTATTGTTTACAAAAGATACTTGTACATTGCAGGGCCCTTCAATGAAGAGGCCTCTGGCTCTTGGTAAGGTGCAAGGAGACCTTTACATCCTCCCACTCAGTGATACTCTTCACAATAAGCAACATGTCTCTCCTTCTGTTGTTAATCTTGTTGACAGTACTGTCTCTAGTAATAACAGTTCATGCAATGATCACTTTTGTTCTGCTGTCAAATCTTGTCCTTCTCATGTGTGGCACAATAGACTTGGTCACTTACCTTTCAATAAAATGAAAACTTTACCTATTTCCTTTATTGATACTGTTGCATCTGATTCTTTACCTTGTACTGTTTGTCCTAAATCTAGGCAACACAGGCAATCATTTCCTATTAGTCAAACACACTCTAAACACTTGTTTGAACTCATACACATTGATCTTTGGGGACCTTATTCTACCACCACATACAATGGCCATGAACACTTTCTTACTATAGTTGATGATTTTAGTAGAGCAACTTGGACATATCTCATGCCTACTAAATCTAATTCTTTGAGTATTCTGCAAAATTTTATTGCCATGGTTGAGACACAATTCAATACTCATGTTAAGACAATTAGATCAGACAATGCTTTGGAATTGGGCCTTAGTAAAGAGGCTAGTTCTTTTTTCCTCAGTAAAGGAATTGTACATCAAACAAGTGTCAGAGATACTCCTCAACAAAATGGCATTGTAGAAAGAAAACACAAACACCTCCTTGAGACTGCCAGAGCATTGTTGTTTCAGTCCAATTTGCCACTCCAATACTGGGGGGAATGCATTCTCACAGCCACATACCTAATAAACAGATTTCCTACCAAGTTACTTCATGGCCGACCCCTTACCAGTTACTGTTTGGAGAAGTTCCTTCCTATCACCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_363777.p1 GENE.S_Transcript_363777~~S_Transcript_363777.p1 ORF type:5prime_partial len:321 (-),score=34.48,rve|PF00665.22|9.3e-17,gag_pre-integrs|PF13976.2|7.6e-07 S_Transcript_363777:180-1142(-)
IPNFKYNLLSVAKLSEQLQCSVLFTKDTCTLQGPSMKRPLALGKVQGDLYILPLSDTLHNKQHVSPSVVNLVDSTVSSNNSSCNDHFCSAVKSCPSHVWHNRLGHLPFNKMKTLPISFIDTVASDSLPCTVCPKSRQHRQSFPISQTHSKHLFELIHIDLWGPYSTTTYNGHEHFLTIVDDFSRATWTYLMPTKSNSLSILQNFIAMVETQFNTHVKTIRSDNALELGLSKEASSFFLSKGIVHQTSVRDTPQQNGIVERKHKHLLETARALLFQSNLPLQYWGECILTATYLINRFPTKLLHGRPLTSYCLEKFLPITI*

Click here to download the sequence:
Link to NCBI Protein BLAST