Transcript Information: S_Transcript_36435.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeHomolog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.387402067007
Replicate 27.5317798834275
Replicate 36.7729358375981
Condition 2: 8 Hour
Replicate 110.883302644606
Replicate 212.574521821639
Replicate 311.135692800533
Condition 3: 24 Hour
Replicate 18.0223451439596
Replicate 26.6819168613024
Replicate 36.2620248178219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36435.p1 GENE.S_Transcript_36435~~S_Transcript_36435.p1 ORF type:complete len:580 (+),score=126.46,LRR_4|PF12799.3|3.7e+03,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|43,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|37,F-box-like|PF12937.3|1.3e-06,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|3.1e+02 S_Transcript_36435:772-2511(+)
ATGGTTTCAAAGAAGAGTAAAGATTCAGAATCTGGGAAAAAGATCACATCTTTCCCAGATGAAGTATTGGAAAAAGTTTTAGGCTTGTTAGAATCCCACAAAGATAGAAGTTCAGTTTCATTGGTATGCAAAGATTGGTATAATGCTGAAAGATGGAGTAGAGCCCATGTGTATATAGGCAATTGTTATGCAGTTTCACCTGAGATTGTTGCAAATAGATTCCCAAATATTAGGAGTGTTTCGTTGAAAGGGAAACCCAGGTTTGCAGATTTCAGTTTGGTGCCTGATAATTGGGGTGCTCATATTCATCCTTGGCTTGTTTGTTTTGCAAAAGCTTACCCTTTTCTTGAAGAGCTTAGGTTGAAAAGGATGTGTTTGAGTGATGAAAGCTTGGAGTTTTTGGCTTTGTCTTTTCCTAACTTCAAGAGACTTTCCCTTCTTAGTTGTGATGGTTTCAGCACTGATGGCCTTGCTGCTATTGCCTCTAATTGCAGGAACTTAGTTGAGCTGGACATTCAGGAGAATGGAATTGATGATCGTAGTGGCAGTTGGCTGAGTTGCTTCCCTGAAAGCTTCTCATCATTGGAAATACTGAATTTCTCAAATCTCCACTCTGAAGTCAGTTTTTCTTCCCTGGAGAGGCTTGTAGCAAGGTGCAAATCTTTGAAGGTGTTGATGGTCAACAAAAGTGTTAATCTGGAGCAGTTACAGAGATTGCTTGTACATGCTCCTAAGTTGGCACAGCTTGGCACCGGAACCTTCTCACAGGAGCTTCAGCCTAGCCAGTATGCAAGCCTTGAAAGTGCATTTAACAACTACAGGAGTCTTCACACTCTCTCTGGTTTATGGGAGGCCAATTCACTGTATCTGCCTCTTCTGTATCCTGCCTGTACAGGGCTGACATTTTTGAATTTGAGTGACGCAGCTTTACAATGTGATGAACTTGCTCAACTTCTTGCTCACTGCCCAAATCTCCGGTGCCTTTGGGTGCTGGATACTGTTGGGGACAAAGGCCTGGAGGCTGTTGGATCCAGCTGCCCATTGCTTGAGGAACTCCGAGTATTTCCTGCAAACCTTGACCCTGAAATAATCCATGGTGTTACTGAGTCTGGTTTTGTTGCGGTGTCATATGGATGCCCCAAACTCCATTATGTCCTCTACTTTTGCCGGCAGATGACAAATGCTGCTGTGGCAACCATTGTGAAGAATTGTCCAGATTTTACTCACTTTCGTCTCTGCATAATGGTTCCCGGCCAACCAGACCACTTGAATAATGAACCAATGGATGAAGCTTTTGGTGCAGTGGTGAAAACTTGTAAGAAGCTTAGAAGACTAGCAGTCTCTGGCTTATTGACTGATGTGACATTTGAATATATTGGGAAATACGCCAAGAATCTGGAGACCCTTTCTGTGGCATTTGCTGGAAGTAGTGACTGGGGTATGCAATGTGTTCTCCAGGGCTGTCCTAAGCTGAGACGGCTGGAAATAAGGGATTGTCCGTTTGGCAATGCTGCGCTTCTTTCAGGCTTGGACAAATATGAATCGATGAGGTCCCTGTGGATGTCAGCGTGCCATGTAACCATGGGTGCCTGTAGGCTGTTGGCAGATAAAATGCCACGGTTGAATGTAGAGGTGATTAAGGATGAAGATAGTGACGGCTGTCATGCTAATAAAGTTTATGTCTATCGTTCTGTGGCTGGACCAAGACAGGATGCCCCACCATTTGTTCTCACACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36435.p1 GENE.S_Transcript_36435~~S_Transcript_36435.p1 ORF type:complete len:580 (+),score=126.46,LRR_4|PF12799.3|3.7e+03,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|43,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|37,F-box-like|PF12937.3|1.3e-06,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|3.1e+02 S_Transcript_36435:772-2511(+)
MVSKKSKDSESGKKITSFPDEVLEKVLGLLESHKDRSSVSLVCKDWYNAERWSRAHVYIGNCYAVSPEIVANRFPNIRSVSLKGKPRFADFSLVPDNWGAHIHPWLVCFAKAYPFLEELRLKRMCLSDESLEFLALSFPNFKRLSLLSCDGFSTDGLAAIASNCRNLVELDIQENGIDDRSGSWLSCFPESFSSLEILNFSNLHSEVSFSSLERLVARCKSLKVLMVNKSVNLEQLQRLLVHAPKLAQLGTGTFSQELQPSQYASLESAFNNYRSLHTLSGLWEANSLYLPLLYPACTGLTFLNLSDAALQCDELAQLLAHCPNLRCLWVLDTVGDKGLEAVGSSCPLLEELRVFPANLDPEIIHGVTESGFVAVSYGCPKLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCIMVPGQPDHLNNEPMDEAFGAVVKTCKKLRRLAVSGLLTDVTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLQGCPKLRRLEIRDCPFGNAALLSGLDKYESMRSLWMSACHVTMGACRLLADKMPRLNVEVIKDEDSDGCHANKVYVYRSVAGPRQDAPPFVLTL*

Click here to download the sequence:
Link to NCBI Protein BLAST