Transcript Information: S_Transcript_36462.p1


Annotated TAIR IDAT5G08139.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2616487-2617617 | Forward length=376
E-Value8.6E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9727320678246
Replicate 210.120545668585
Replicate 310.828762471105
Condition 2: 8 Hour
Replicate 16.9454252867727
Replicate 29.5439537774981
Replicate 38.3112249835936
Condition 3: 24 Hour
Replicate 113.427588934585
Replicate 210.292281403938
Replicate 312.09038367126


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36462.p1 GENE.S_Transcript_36462~~S_Transcript_36462.p1 ORF type:complete len:436 (+),score=133.07,zf-RING_2|PF13639.2|9.2e+03,zf-RING_2|PF13639.2|7.5e-11,zf-RING_11|PF17123.1|3.5e-08,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|1.3e-05 S_Transcript_36462:362-1669(+)
ATGGCGGAAGTATCCTTCCTGCATTTCCCAGAAGAAGAAAACGAAGATTTAGTATTAGACGAAATCATAACCCTTGATTGCCCTTGCTACCCTTTATCAAGTGATAGCAATTCAGGAAACCCTAGATCAGGAGGACCCACAATCACTACTACTACTGGTGACCGGAAAAATCAGGTAAATTTTGTCATGGATTTGTTTCATCAACGTGTTGAGCAATCTCATGATGTTTTGGGCACTGATGTTTTTGTGTCAGAACCCGTAAATGAATCATCTTTTGGGGTTATTGAGGATAATTATGATCTGGGTCTTAATTGTTTGGATGTAGAATTAGGGTTAGAGTTAGGGTTAGGGTTAGGATCTGGGGTTACTGATTTTGATGTTGATGTGGATGAGGATGGCTTTAATTTTGGTGGGTTTGTTATGTCTGATTGTGGGGATGAGTTTTTTGTTGCTAGAAGAGAAAGTAATGGTAATGGTAATGATGAGAATAATAGTAGAATTGGGGTTAGTTGTTCTAGGATAAGTGGGTTAAGGGTAGTTGGGTTAGAGTCAGATTCAGAAGAGGAAGAAGAAGAGTGTAATGATTTGTTGGGGATTGATTTGCATTCTGAGGAGGAAGATTTTGGGGTTGAAAATGTGAATGATATTGATGATATCACTACCCCACTGTGTTGGGAATCATTTCAGTTGGAGGATCATGGGGAAGGCCATAATGATTTTGAGTGGGAGGAGGTTGATGGTAGGGTTGTTGATGACAGGGAAGTTTTGAGTGTTGTAAATGATCCTGATGAGGACGGTTTGATTTCAGTTTTGCCCATTTCAGGCCCCGAGGATGATGGAGTTGGAGAGAGGGGGAGAGGGTTGGGGAATTTGGAGTGGGAGGTGTTGTTGAATGTTAATAACTTGGAGAGGAATCCCGAGATGGAGAGTGATGCTGGCCCTTTTGGTGATAATGATGATAATTTTTATGCTGCTGAGTATGAGATGATGTTGGGGCAGTTTGCGGATGGTGAGAATGCGTTCTTGAGCAGGCCTGCTGCTTCCAAGTCTGTTGTTGAGAAGTTGCCTTCGGTTGTTATGACTGAAGAGGATGTGCTGAATGAGAGAACAATGTGTGCTGTTTGTAAGGATAATATTGGAGTTGGTGAGGAGGGCAAGCAGTTGCCTTGTTCTCATAGGTACCATGGTGATTGTATCATTCCGTGGTTGGGGATACGGAACACATGTCCTGTGTGCCGCCATGAATTGCCTACCGATGACCCTGATTATGAGCACAGGAGGATTCGGAGAGGTGCTCGTGCCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36462.p1 GENE.S_Transcript_36462~~S_Transcript_36462.p1 ORF type:complete len:436 (+),score=133.07,zf-RING_2|PF13639.2|9.2e+03,zf-RING_2|PF13639.2|7.5e-11,zf-RING_11|PF17123.1|3.5e-08,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|1.3e-05 S_Transcript_36462:362-1669(+)
MAEVSFLHFPEEENEDLVLDEIITLDCPCYPLSSDSNSGNPRSGGPTITTTTGDRKNQVNFVMDLFHQRVEQSHDVLGTDVFVSEPVNESSFGVIEDNYDLGLNCLDVELGLELGLGLGSGVTDFDVDVDEDGFNFGGFVMSDCGDEFFVARRESNGNGNDENNSRIGVSCSRISGLRVVGLESDSEEEEEECNDLLGIDLHSEEEDFGVENVNDIDDITTPLCWESFQLEDHGEGHNDFEWEEVDGRVVDDREVLSVVNDPDEDGLISVLPISGPEDDGVGERGRGLGNLEWEVLLNVNNLERNPEMESDAGPFGDNDDNFYAAEYEMMLGQFADGENAFLSRPAASKSVVEKLPSVVMTEEDVLNERTMCAVCKDNIGVGEEGKQLPCSHRYHGDCIIPWLGIRNTCPVCRHELPTDDPDYEHRRIRRGARAP*

Click here to download the sequence:
Link to NCBI Protein BLAST