Transcript Information: S_Transcript_365329.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value1.4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22062789557515
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22371848639727
Replicate 30.21315847604981
Condition 3: 24 Hour
Replicate 10
Replicate 20.22663811576347
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_365329.p1 GENE.S_Transcript_365329~~S_Transcript_365329.p1 ORF type:internal len:100 (+),score=6.74 S_Transcript_365329:3-299(+)
CTGGGAAACCATCACACACTGCTAAAATACTCTGTGGAATCAAAAATGCGCCAGGATACCTTTCTGTCAGAAGCGATTACGGAAGAGGTTGTTAGATCTCAGTCTTTATTGCTCATCGAGCATCCTGCATCATATTCCTCATGTGCTATTGGAAATATGCAATTCCTTCCTTTTCCAACTAAGGAATTGCAGTTTTTATCACTTGTGTCTCTATTGAAAGTAAAGGGTCCTGCTTGCTCAACATGCTTGGGTAGTGGTTTTTTTTTTGTGATGATAAAGTATAAACCATGTTGCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_365329.p1 GENE.S_Transcript_365329~~S_Transcript_365329.p1 ORF type:internal len:100 (+),score=6.74 S_Transcript_365329:3-299(+)
LGNHHTLLKYSVESKMRQDTFLSEAITEEVVRSQSLLLIEHPASYSSCAIGNMQFLPFPTKELQFLSLVSLLKVKGPACSTCLGSGFFFVMIKYKPCCF

Click here to download the sequence:
Link to NCBI Protein BLAST