Transcript Information: S_Transcript_365367.p1


Annotated TAIR IDAT3G07970.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)QRT2
Annotation TypeOrtholog
Chromosome Positionchr3:2541006-2543370 | Forward length=439
E-Value1.5E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28616130360409
Replicate 20.18978743705389
Replicate 30.51560337438023
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 20.3848920196082
Replicate 30.36672425987065
Condition 3: 24 Hour
Replicate 10.37582595252635
Replicate 20.34117565813856
Replicate 30.70513242422905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_365367.p1 GENE.S_Transcript_365367~~S_Transcript_365367.p1 ORF type:5prime_partial len:465 (+),score=53.49,Glyco_hydro_28|PF00295.13|1.4e-101 S_Transcript_365367:3-1397(+)
GGAATTAAAGTCATAGAAGACAGAAAAACAATGTGTCCAAAAGGTCATTTCCTCATACTTGTTGTTCTTACCATTGTAACAATCTCATCATTCTTTCCCTTTTGTCTTTGTAGTTACCCTTTCCCCGAGCTTGACATCAAAAATTACCATACAACTAAAAATTATTCTAGTGATATCACAGAAAAGGAAGAGGTCCTACAGGGGAATTATTATGCGCTTGGCTTGCAAACTCTAGTCGATGATGTTATGCCAGCCCGAGCCCTTGCTCCTTCTTCTTCCCCTCCTAGAGTGGTTAGCGTAGATGATTACTTGGGGTCGGATAGAAGGAAGGATCATACCAAGGCATTTAAGAAAGCTTGGAAGGAGGCTTGTTCTACAAGGGCTGGAGTTTTCCTTGTGCCCAAAAAGAAATACAGAGTCAGGCCAATAACATTCTCAGGCCCCTGCCATTCTCATTTTACTATAAAGATCTTAGGAACCATTGAGGCCTTGGAAAATATGATGGATTACAAAGATAGAAGACATTGGCTAGTGTTCCAGAATATACGCAACTTCCAAATGCAAGGTGGAGGAACCATTGATGGTAAGGGAAATATTTGGTGGCAAAACTCTTGTAAGATCAACAAAACCAAGCCCTGCACACATGCACCTACGGCGATGACATTCTATGAATGCAAGAATTTCAGAGTAGATGGACTGAGGTTAATGAATGCACAGCAAATGCACCTCTCATTTCAGAAATGTGCTATTGTCAGAGTTACAAATTTGTTCATAAGTGCACCAGAACATAGCCCTAACACGGATGGTATTCATATCACTCAGACAAGAAGTATTCAAATTAAAAGAACTCGCATTCAAACAGGTGATGACTGCATATCAATAGTAAGTGGGTCAAAAATTGTGGAAGCAACAGACATAAGTTGTGGACCAGGGCATGGAATCAGTATTGGAAGCCTAGGGAAAGGAGGATCAAAGGCCCATGTTTCAACTGTATTGGTAAGAAGGGCAAAATTTTCAGGTACTACAAATGGAGTGAGGATTAAGACATGGCAGGGAGGGCGCGGATATGCAAAAAACATTGCATTCGAAAATATATCTATGCGAAACGTTAGTAATCCAATAATCATCGACCAACATTACTGTGATCAAAAAGAGCCATGCCCAGAAAGAAAAATGGCAGTGCAAGTGAAGAATGTGGTGTACAAAAACATAAAAGGGACAAGTGCTACAGAAGTTGCCATAAAATTGGATTGCAGCAAAAGGCATCGATGCGGAGGGATTGTGTTGGAAAATGTCAAGCTGAAGGGAGAAGACCACAAACAAGTCAAGGCTGATTGTCATAATGTTAAATTGTATCAAAGAGGAAAGGTTTCACCTAAATGCTTTCCTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_365367.p1 GENE.S_Transcript_365367~~S_Transcript_365367.p1 ORF type:5prime_partial len:465 (+),score=53.49,Glyco_hydro_28|PF00295.13|1.4e-101 S_Transcript_365367:3-1397(+)
GIKVIEDRKTMCPKGHFLILVVLTIVTISSFFPFCLCSYPFPELDIKNYHTTKNYSSDITEKEEVLQGNYYALGLQTLVDDVMPARALAPSSSPPRVVSVDDYLGSDRRKDHTKAFKKAWKEACSTRAGVFLVPKKKYRVRPITFSGPCHSHFTIKILGTIEALENMMDYKDRRHWLVFQNIRNFQMQGGGTIDGKGNIWWQNSCKINKTKPCTHAPTAMTFYECKNFRVDGLRLMNAQQMHLSFQKCAIVRVTNLFISAPEHSPNTDGIHITQTRSIQIKRTRIQTGDDCISIVSGSKIVEATDISCGPGHGISIGSLGKGGSKAHVSTVLVRRAKFSGTTNGVRIKTWQGGRGYAKNIAFENISMRNVSNPIIIDQHYCDQKEPCPERKMAVQVKNVVYKNIKGTSATEVAIKLDCSKRHRCGGIVLENVKLKGEDHKQVKADCHNVKLYQRGKVSPKCFPD*

Click here to download the sequence:
Link to NCBI Protein BLAST