Transcript Information: S_Transcript_365999.p1


Annotated TAIR IDAT1G62930.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23306534-23308423 | Forward length=629
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37220980748504
Replicate 20.46285572498283
Replicate 30.51588072961121
Condition 2: 8 Hour
Replicate 11.4912860361631
Replicate 20.62578597593641
Replicate 30.44718561409052
Condition 3: 24 Hour
Replicate 10.76380711505574
Replicate 20.63395277136636
Replicate 31.0582675974175


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_365999.p1 GENE.S_Transcript_365999~~S_Transcript_365999.p1 ORF type:5prime_partial len:143 (+),score=19.74,PPR_2|PF13041.2|3.1e-07,PPR_2|PF13041.2|3.3e-16,PPR_2|PF13041.2|5.3e-14,PPR_2|PF13041.2|5.9e-07,PPR_1|PF12854.3|5.4e-07,PPR_1|PF12854.3|4.3e-08,PPR_1|PF12854.3|3.3e-07,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|5.1e-07,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|96,PPR|PF01535.16|0.0013,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|9.3e-05,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|24 S_Transcript_365999:2-430(+)
CATAACATCCTTATAGATGGCTTGTGCAAGGGTAATAGGCTCCAACATGCACTTCACCTCTTCAAAGAGATGCATGCTCATGGGTTAATCCCGGATGTAGTCGCCTATAATTCATTGTTGGATGGGCTCTATGAGAATGGACAACTTGATGAGGCTGTAGCAATGTCTAAAGAGATGGAAACTAAAGGAGTGGTAAAGGATCTTGTGACCTACACTGTCTTAATTGATGCTATGTGTGAAAAAGGGAATTGGCAAAAGGCAGCACATATCTTCTCTAAGTTCATGGTTAAGGGACTGCAACCAAATCCTATCACTTATACTGTAATGATAAAAGGGGGACTGCAACCAAATCCTATCACTTATACTGTAATGATAAAAGGACTTTGCAAGAAAGGGCTCTGTACAGATGGTATTAGAGTGATCCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_365999.p1 GENE.S_Transcript_365999~~S_Transcript_365999.p1 ORF type:5prime_partial len:143 (+),score=19.74,PPR_2|PF13041.2|3.1e-07,PPR_2|PF13041.2|3.3e-16,PPR_2|PF13041.2|5.3e-14,PPR_2|PF13041.2|5.9e-07,PPR_1|PF12854.3|5.4e-07,PPR_1|PF12854.3|4.3e-08,PPR_1|PF12854.3|3.3e-07,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|5.1e-07,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|96,PPR|PF01535.16|0.0013,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|9.3e-05,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|24 S_Transcript_365999:2-430(+)
HNILIDGLCKGNRLQHALHLFKEMHAHGLIPDVVAYNSLLDGLYENGQLDEAVAMSKEMETKGVVKDLVTYTVLIDAMCEKGNWQKAAHIFSKFMVKGLQPNPITYTVMIKGGLQPNPITYTVMIKGLCKKGLCTDGIRVIP*

Click here to download the sequence:
Link to NCBI Protein BLAST