Transcript Information: S_Transcript_366.p1


Annotated TAIR IDAT5G49890.1
Annotated Gene Namechloride channel C
Annotated Gene Symbol(s)CLC-C, ATCLC-C
Annotation TypeOrtholog
Chromosome Positionchr5:20288489-20292143 | Reverse length=779
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.278013688552
Replicate 252.437868922778
Replicate 347.013666951298
Condition 2: 8 Hour
Replicate 147.743817657643
Replicate 246.515159112995
Replicate 348.511929032027
Condition 3: 24 Hour
Replicate 155.016743605941
Replicate 255.805656090929
Replicate 361.686098385437


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_366.p1 GENE.S_Transcript_366~~S_Transcript_366.p1 ORF type:complete len:783 (+),score=146.86,Voltage_CLC|PF00654.16|95,Voltage_CLC|PF00654.16|1.5e-89,CBS|PF00571.24|0.21,CBS|PF00571.24|0.00054 S_Transcript_366:992-3340(+)
ATGGATCCACATGATGATGTTGACCACAATGATGATGTCAATGATGTCGAAAACCTTGGAGAATTAGATGGGAAGGAGGACGAGGATAGATTTTGGTCAGACTTTTCAGAGAGAAACTTGTCAATTCGACAACCCCTTCTGAGAAAGAAGACAAATACTACCTCACAGATTGCTGTTGTTGGTGCAAATGTTTGCCCCATTGAGAGCCTTGACTATGAGATTATTGAAAATGAATTGTTTAAGCAGGACTGGAGGTCAAGGAAAAAGGTTCAAATATTTCAGTATATTTTCCTCAAGTGGGCGTTGGCCCTTCTCATTGGACTTGGCACTGGACTTGTTGGCTTCTTTAGTAACATTGCAGTTGAGAACATAGCTGGTTTCAAATTGTTACTTACTAATGACCTGATGATTGAGGGCAAATATTTCAAGGCATTTCTTGTATTTGCTGGATGCAACCTAGGGTTGGCCATGGTTGCTGGAACACTTTGTGCCTTTGTTGCTCCTGCTGCTGCCGGATCTGGTATTCCTGAGGTCAAAGCTTATCTTAATGGTGTGGATGCTCCCTCAATATTGGCTCCAAGTACACTCTTTGTAAAGATAATTGGGTCTGTTCTTGGTGTTTCTGCGGGATTTGTGGTCGGTAAGGAAGGACCCATGGTGCACACTGGTGCCTGCATTGCCAATTTACTAGGTCAGGGTGGTTCCCGCAAGTATGGCCTGACCTGGACATGGCTTAGATACTTCAAGAATGATCGAGATCGGCGGGATTTGATCACTTGTGGTTCGGCCGCAGGAGTCGCTGCTGCTTTCCGTGCACCTGTTGGTGGTGTCCTTTTTGCCCTTGAAGAGGCTGCCTCCTGGTGGCGGAGTGCTCTTCTGTGGAGGACATTTTTCACAACAGCTGTGGTTGCCATAGTTTTAAGAGGCTTCATTCAATATTGTGGGACTGGGATGTGTGGTTTGTTTGGTAAAGGTGGGCTGATAATGTATGATGTGAGTGCAGCAGAAGCAACATACACCGCTTATGATATTCTGGCCGTAGTGTTTCTTGGAGTTATTGGAGGTGTTCTGGGAAGCTTCTATAACTATCTCGTGGACAAGGTTCTTCGCACTTATAGTATGATCAATGAGAAAGGTCCCTCCTTCAGAGTTCTGCTTGTGCTCATTGTATCCATTCTCACTACATGTTGTGCCTTTGGCATTCCATGGATGGCAAAGTGCACTCCCTGTCCCACAGATCTGAATGTAAAATGCCCGACTATTGGTGAATCCGGAAACTTCAAGAGCTTTCAATGCCCACCTGGTCACTACAATGATCTTGCTTCTCTCTTTTTCAACACCAACGATGATGCTATCCGTAATCTTTTCAGTACCAGCACAGTTAGAGAATTTCAGATCTCTTCACTCTTCATTTTCTTCGCTACAATCTTTGCCCTCGGGATTATCACCTATGGAATTGCCGTCCCAGCAGGGTTGTTCATTCCTGTGATTTTAGCTGGATCTGTCTATGGTCGGCTTGTTGGCAGGCTTTTTGAACATGTGACTGTCCTCGACACGGGCCTCTTCTCCATTCTTGGGGCTGCCTCGTTCCTTGGAGGTACAATGAGAATGACAGTTTCTTTGTGTGTGATACTGCTCGAGCTTACCAACAATCTATTGTTGCTTCCCCTTGTGATGATCTCTCTCCTTATATCAAAAACTGTGGCCGATATCTTCAACCATGGTGTATATGACCAGATAGTGAAATTGAAAGGGTTGCCGTACATGGAAGCCCATCCGGAGCCCTACATGAAGCACTTGATGGCTGGGGATGTCGTTTCTGGGCCGTTAGTCACATTTTGTGGTGTTGAAAGGGTGGGCAACATTCTGCATGCTTTGAAAGCAACAGGGCATAATGGATTTCCTGTCATCGACGAACCACCTTTCTCAGATGCACCCGAGTTGTGTGGCATAGTTTTGAGGTCACATCTGCTTGTTTTGCTCAAGGCCAAGTACTTCACCAAGGAGAGGGTGCGTTCGGGGAGAGACATTGTGAAGAAGTTTTCTCCATATGACTTTGCTAAGCCGGGAACAGGAAAGGGGCTCAAGCTGGAGGATATAATTATCGAAGAGGATGAGATGGACATGTACATCGATCTCCATCCGATTTCTAATACATCCCCATACACAGTTGTTGAGACAATGTCATTAGCCAAAGCTCAGGTTCTGTTCAGGCAACTTGGACTCCGGCATATGTGCGTGGTACCAAAGAGCCAAGGGAGACCTCCAATTGTCGGAATTTTGACTCGACATGACTTCATGCCGGAACACATATTGGGACTCTACCCCCATATCAGGCTACACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_366.p1 GENE.S_Transcript_366~~S_Transcript_366.p1 ORF type:complete len:783 (+),score=146.86,Voltage_CLC|PF00654.16|95,Voltage_CLC|PF00654.16|1.5e-89,CBS|PF00571.24|0.21,CBS|PF00571.24|0.00054 S_Transcript_366:992-3340(+)
MDPHDDVDHNDDVNDVENLGELDGKEDEDRFWSDFSERNLSIRQPLLRKKTNTTSQIAVVGANVCPIESLDYEIIENELFKQDWRSRKKVQIFQYIFLKWALALLIGLGTGLVGFFSNIAVENIAGFKLLLTNDLMIEGKYFKAFLVFAGCNLGLAMVAGTLCAFVAPAAAGSGIPEVKAYLNGVDAPSILAPSTLFVKIIGSVLGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYGLTWTWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRGFIQYCGTGMCGLFGKGGLIMYDVSAAEATYTAYDILAVVFLGVIGGVLGSFYNYLVDKVLRTYSMINEKGPSFRVLLVLIVSILTTCCAFGIPWMAKCTPCPTDLNVKCPTIGESGNFKSFQCPPGHYNDLASLFFNTNDDAIRNLFSTSTVREFQISSLFIFFATIFALGIITYGIAVPAGLFIPVILAGSVYGRLVGRLFEHVTVLDTGLFSILGAASFLGGTMRMTVSLCVILLELTNNLLLLPLVMISLLISKTVADIFNHGVYDQIVKLKGLPYMEAHPEPYMKHLMAGDVVSGPLVTFCGVERVGNILHALKATGHNGFPVIDEPPFSDAPELCGIVLRSHLLVLLKAKYFTKERVRSGRDIVKKFSPYDFAKPGTGKGLKLEDIIIEEDEMDMYIDLHPISNTSPYTVVETMSLAKAQVLFRQLGLRHMCVVPKSQGRPPIVGILTRHDFMPEHILGLYPHIRLHK*

Click here to download the sequence:
Link to NCBI Protein BLAST