Transcript Information: S_Transcript_36628.p1


Annotated TAIR IDAT5G65260.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26080501-26082984 | Reverse length=220
E-Value1.2E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.912024511633
Replicate 235.045892643283
Replicate 322.485951301928
Condition 2: 8 Hour
Replicate 130.921815959843
Replicate 228.136901943041
Replicate 334.26932422647
Condition 3: 24 Hour
Replicate 124.281428187622
Replicate 223.797002155165
Replicate 332.497634137361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36628.p1 GENE.S_Transcript_36628~~S_Transcript_36628.p1 ORF type:5prime_partial len:260 (+),score=81.71,RRM_1|PF00076.18|1.3e+03,RRM_1|PF00076.18|3.1e-16,RRM_6|PF14259.2|6.5e+03,RRM_6|PF14259.2|9.8e-12,RRM_5|PF13893.2|3.5e+03,RRM_5|PF13893.2|1e-06 S_Transcript_36628:1-780(+)
CAAGGACTCACAGTTACTCCTCCCCCCTGCTCTCTCGAAGCTGCATCTCGAGAGCCAAGAGGAGAGAGAGGGGGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGGAGAGAGATTTCATTGAAGAAGAAGAAGAAGCAGAGAAAAATCGAATGGAGCAAACAGAAGAGCAAGACGTCGACATGACGTCAGCTGCCGATATCAACGACAATGACACTTCTGCGGATGTTGAAGATATGAGGAAGAGATTGAAGGAGATGGAGGATGAAGCTGCTGCTCTCCGTGAAATGCAGGCTAAAGTCGAGAAAGAGATGGGCTCCGTTCAAGATCCCGCTGCAGCTGCTGCTGATCAAGCAAATAAAGAGGAAATTGATTCTCGGTCAGTGTTTGTGGGCAATGTGGATTATGCTTGCACACCTGAAGAGGTACAACAGCATTTTCAGGCATGTGGAACTGTAAACAGGGTTACTATTCGAACTAATAAATTTGGCCAACCAAAGGGATATGCTTATGTTGAATTCTTGGAGGCAGAGGCTGTTCAAGAAGCACTCCGTTTGAATGAATCTGTATTACATGGCCGCCAATTGAAGGTGTCAGCCAAGAGGACAAACATTCCAGGGATGAAGCAGTTTCGGCCTCGGCGTCCCAGTCCATTCATGGGCTATGGTTTCAGGGGTGCATATCCACCACCTTATTTTTACTCCCCCTATGGATATGGGAAAGCCCCAAGGTTCAGAATGCCAATGCGTTATGGCCCTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36628.p1 GENE.S_Transcript_36628~~S_Transcript_36628.p1 ORF type:5prime_partial len:260 (+),score=81.71,RRM_1|PF00076.18|1.3e+03,RRM_1|PF00076.18|3.1e-16,RRM_6|PF14259.2|6.5e+03,RRM_6|PF14259.2|9.8e-12,RRM_5|PF13893.2|3.5e+03,RRM_5|PF13893.2|1e-06 S_Transcript_36628:1-780(+)
QGLTVTPPPCSLEAASREPRGERGGREKREERREKREERREERDFIEEEEEAEKNRMEQTEEQDVDMTSAADINDNDTSADVEDMRKRLKEMEDEAAALREMQAKVEKEMGSVQDPAAAAADQANKEEIDSRSVFVGNVDYACTPEEVQQHFQACGTVNRVTIRTNKFGQPKGYAYVEFLEAEAVQEALRLNESVLHGRQLKVSAKRTNIPGMKQFRPRRPSPFMGYGFRGAYPPPYFYSPYGYGKAPRFRMPMRYGPY*

Click here to download the sequence:
Link to NCBI Protein BLAST