Transcript Information: S_Transcript_366450.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2322398900791
Replicate 30
Condition 2: 8 Hour
Replicate 10.22447779281193
Replicate 20.47098628715214
Replicate 30.44875468642066
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_366450.p1 GENE.S_Transcript_366450~~S_Transcript_366450.p1 ORF type:internal len:95 (+),score=13.20 S_Transcript_366450:2-283(+)
AAACTTTTACAACCACTACTGCATTTGCTTGGTTTGTTGCATGATCAGATCAGGGACAGCAACCATGTTTTGAGGCAAAACTTATTCAATTTGGTTGAAGAGATTTTGTCTTATGGACTGTTTCATCCAGTTCACCTCGATGAATACCTTAGCATCCATAGTGCAGAGAAATATAGCTCTTCAGTGGATGGAAAATTGGACAATACAAGAACAACAATCAAAAGTTATCACAGGCACCTTTTTGACAAACTAGAGAGCCTAATTTCTGAGAGAAAGGTACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_366450.p1 GENE.S_Transcript_366450~~S_Transcript_366450.p1 ORF type:internal len:95 (+),score=13.20 S_Transcript_366450:2-283(+)
KLLQPLLHLLGLLHDQIRDSNHVLRQNLFNLVEEILSYGLFHPVHLDEYLSIHSAEKYSSSVDGKLDNTRTTIKSYHRHLFDKLESLISERKVQ

Click here to download the sequence:
Link to NCBI Protein BLAST