Transcript Information: S_Transcript_36666.p1


Annotated TAIR IDAT1G76980.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28926466-28927242 | Reverse length=258
E-Value8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.796941290589
Replicate 210.208878501394
Replicate 311.000930295481
Condition 2: 8 Hour
Replicate 15.3781137861191
Replicate 23.8758246546895
Replicate 36.3106127777905
Condition 3: 24 Hour
Replicate 118.970556715516
Replicate 215.009805035212
Replicate 315.597843250532


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36666.p1 GENE.S_Transcript_36666~~S_Transcript_36666.p1 ORF type:complete len:456 (+),score=91.83 S_Transcript_36666:61-1428(+)
ATGATCTTGCCATTCCAATCTTCCCTTCTTTTTTGTTCTTTTCACTTCGTTCACACTTACAACCAAACCAACCACAAACCTTTAAGCATATCTCTCCCCTTTTATCCTGTTTCATCCCCCCTTAAGAAAAAAAAAAATATGCATGATTCTGGAACTAAACCTCCTGAAAGTCGTATCCATTTATTTGATCCTGTTGGTCTTTTAAATGATGGTTATGGATACAGAGCTTCGAATTACACCGTTCGCCCTCGAAGGCCAACAAAATCCTATGATAACTTCATAGATGCTAACACCACCACTGGGGGGATTAGATCTTATGATAGCTACAGTGATGCTAATAGTGTTGTGGGAGGTTTGAAGTCTTATGATAGCTTTAGTTCGGATACAAATGTTGGTGGGGGTTTTAACTCTTATGATCATACCAGTAGTAGTAATAATAAGGATATAAATTTTGGAGGGGGTCCAAAATCTTATGATCATACCAGTAATAATAAGGATATAAATGGTGGTGGTGGGGGGTTAAGGTTTGGAGTTGATGCAACAGTGGAAGATGATTCTGATGTTTCCACACCGCGGTTGTGGAAACCCAGTTCTCCTACAAGTCCTAAAAGTCTGTCTGTTAATTCTTCTCCTTTACACCCTGCTGCAAGTCCTAAGTCTGTCAAGTTTACTCCTCCTATGTCTCTTAATTCTTCTCCTGTGCATCCTAGCCACAATCACTATCATACCATTTCCCCGAATTCTAGGACTCAGGCGATTGCCAAAGGCCGGAGAGAGCTGATGGAGATGGTCCGAGACTTGCCTGAGTCCTTCTACGAGCTCTCGTTGAAGGATTTAGTGGAGCAGAAACCTGATATGGAGGTTCAGAAGGAGGCTAACCTTCCTGAAGAAAAGAGGCCTGCTGTTGTTAAGGAAGCAACAAAGACCAAGGAGACTAAGAAGCAGCAGAAGAAGAGTAGCAAGAAGGTTAAGAAGAGTGAGAGCAAGAAGAAGATGATGAGGAGCAGAAGTGTTGATAATGGGAAATTTCTCCTAAGGACATCAGTTTTCCCAATTTTTATGGGATCAAAGAAGAATAAGAAGAATTTGGGTAGTAGTAGTAGCAGCTTTAAAGTAGCCCCGGTACCAAAACCACCACCGACAGCAGGTGGATCAATCAAGGGTGTTGAGAAAGACTGGTGGAGGAGAAAATCGTGCATCTCAAGCGAGAGCGAAGAGAGCAACGGACTGAGTAGCAATAGTGCCAGCAGCAGTAGCAGCACCAGCACCAACACCAGTCGCAGTAACAGCGGCAATGGAAGGCGAAGAAATCGATTTATACCCAGCTGTTGCTTCTTCAATGGGAGGAGAATCAGAGGCAGGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36666.p1 GENE.S_Transcript_36666~~S_Transcript_36666.p1 ORF type:complete len:456 (+),score=91.83 S_Transcript_36666:61-1428(+)
MILPFQSSLLFCSFHFVHTYNQTNHKPLSISLPFYPVSSPLKKKKNMHDSGTKPPESRIHLFDPVGLLNDGYGYRASNYTVRPRRPTKSYDNFIDANTTTGGIRSYDSYSDANSVVGGLKSYDSFSSDTNVGGGFNSYDHTSSSNNKDINFGGGPKSYDHTSNNKDINGGGGGLRFGVDATVEDDSDVSTPRLWKPSSPTSPKSLSVNSSPLHPAASPKSVKFTPPMSLNSSPVHPSHNHYHTISPNSRTQAIAKGRRELMEMVRDLPESFYELSLKDLVEQKPDMEVQKEANLPEEKRPAVVKEATKTKETKKQQKKSSKKVKKSESKKKMMRSRSVDNGKFLLRTSVFPIFMGSKKNKKNLGSSSSSFKVAPVPKPPPTAGGSIKGVEKDWWRRKSCISSESEESNGLSSNSASSSSSTSTNTSRSNSGNGRRRNRFIPSCCFFNGRRIRGRK*

Click here to download the sequence:
Link to NCBI Protein BLAST