Transcript Information: S_Transcript_366984.p1


Annotated TAIR IDAT4G20900.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)MS5, TDM1
Annotation TypeOrtholog
Chromosome Positionchr4:11184103-11185844 | Reverse length=450
E-Value9.2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0149025894772
Replicate 20.28045918929044
Replicate 30.35166234057713
Condition 2: 8 Hour
Replicate 10.49699002857725
Replicate 20.1895919376248
Replicate 30.67741041117526
Condition 3: 24 Hour
Replicate 10.092563065638111
Replicate 20.28809929969933
Replicate 30.37405574329621


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_366984.p1 GENE.S_Transcript_366984~~S_Transcript_366984.p1 ORF type:complete len:472 (+),score=96.72,TPR_12|PF13424.2|24,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|2.9e-07,TPR_12|PF13424.2|1.1e+02,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|5.3e-06,TPR_2|PF07719.13|7.9,TPR_1|PF00515.24|2.9e+02,TPR_1|PF00515.24|1.6e-07,TPR_1|PF00515.24|7.6,TPR_19|PF14559.2|4.6,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|0.52,TPR_19|PF14559.2|1.7e-06,TPR_11|PF13414.2|99,TPR_11|PF13414.2|2.4e-07,TPR_11|PF13414.2|1.5e+04,TPR_8|PF13181.2|79,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|8.9e-06,TPR_8|PF13181.2|4.7e+02,TPR_7|PF13176.2|6.9e+02,TPR_7|PF13176.2|9.8e+02,TPR_7|PF13176.2|1.4e-06,TPR_7|PF13176.2|1.4e+03 S_Transcript_366984:185-1600(+)
ATGTGGGCCAACGAAAACCACCTGAATTCTCCGGCAACACAAGAGAAGCGCTTCTTCTACACTCCACCTGCTAAATTGAAGTCATGGACACGAAAACCCTGGATGTCAGAAAGAAAACCCACAAGCTCAACTGATCCTTTCCATGTCATTCACAAAGTCCCTGTTGGCGACACTCCTTATGTCAAGGCCAAACGTGTTCAGTTAATTGACAAGGATCCTGGAAAGGCAGTATCACTATTTTGGAGTGCTATAAATTCTGGTGACCGGGTTGATAGCGCCTTGAAGGATATGGCGGTAGTGATGAAGCAATTGAATCGTTCGGATGAGGCAATCGAAGCAGTTAAATCCTTTCGTCATCTCTGCTCCCCAGCTTCCCAAGAATCTCTTGATAACGTATTAGTGGAACTCTACAAGCGGTCTGGTAGGCTAGAAGAGCAAATACAAATTCTTCAGCATAAACTGAAACTGGTTGAAGAAGGCAATGCTTTTGGTGGCAAACGAGTGAAATTGGCAAGATCTCAAGGCAAGAAAGTGCACATTACAGTTGAACAAGAATATGCGAGGCTTTTAGGGAACTTGGCATGGGCATACCTGCAACAAAATGACTACAAAACTGCCGAAGAGTATTATAGGAAAGCCCTGTCAATCGAGATCGACAGAAACAAACAGTGCAATTTGGCTGTATGCCTGATGTACATGAACAGGACAGCTGAAGCGAAATTTCTGCTTCAAGTGATTCGAGATTCAGCTCCTGAAGGGCAGATGGATGAGTCTTATGCCAAGTCCTTTGACCGTGCCTTTCAAATGCTGGCTGAAATGGAGGAGGGACTTCCACCAGGTGTTCAATCTTCATGTCAACAACAAAAGGAGAATCGTCTTGAACAGCCTATCCGAAACCATGTTCTTCCAAAGAGTCCATTGACACAGCCTAGAAGAGACCGAATTTATTACCATAATAATCCAACTAGCCATTCACATCGCAGACTGCAATTTGACAAACCTTTTGGAGGCATAAATATACAAAAGGAGTCTTGTGCAATTCAAGAAGTTCATAACAGGACAATCCCTGAGATCGACAAGCAGAAGAATGCAGAGACAACAGATTACAGTACACAAAATGAAGATGAGCAGGAACAGGATTTGTTGGTCTATGAGAGTAAAAAGAGCTGGGCTGACATGGTTGAGGAAGAAGAACAGGAGTTGATAAATGAACTTGTTACAGGAGAGAATGTGGATTTGAACGTAATAGGGTCATCACAGAATCCTGAGACTCCTGCTGAGAATTTGAGCAGTAAACTCCAACGTTGTAGTCTTATTGATCAGCCATCAGTACGACGGTCTTTGGTTTTTACACAACAACAGAAGGAAGACCAAACAAACTCTAATAAGAGGGTTTTCCAAGACATAACTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_366984.p1 GENE.S_Transcript_366984~~S_Transcript_366984.p1 ORF type:complete len:472 (+),score=96.72,TPR_12|PF13424.2|24,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|2.9e-07,TPR_12|PF13424.2|1.1e+02,TPR_2|PF07719.13|2e+02,TPR_2|PF07719.13|5.3e-06,TPR_2|PF07719.13|7.9,TPR_1|PF00515.24|2.9e+02,TPR_1|PF00515.24|1.6e-07,TPR_1|PF00515.24|7.6,TPR_19|PF14559.2|4.6,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|0.52,TPR_19|PF14559.2|1.7e-06,TPR_11|PF13414.2|99,TPR_11|PF13414.2|2.4e-07,TPR_11|PF13414.2|1.5e+04,TPR_8|PF13181.2|79,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|8.9e-06,TPR_8|PF13181.2|4.7e+02,TPR_7|PF13176.2|6.9e+02,TPR_7|PF13176.2|9.8e+02,TPR_7|PF13176.2|1.4e-06,TPR_7|PF13176.2|1.4e+03 S_Transcript_366984:185-1600(+)
MWANENHLNSPATQEKRFFYTPPAKLKSWTRKPWMSERKPTSSTDPFHVIHKVPVGDTPYVKAKRVQLIDKDPGKAVSLFWSAINSGDRVDSALKDMAVVMKQLNRSDEAIEAVKSFRHLCSPASQESLDNVLVELYKRSGRLEEQIQILQHKLKLVEEGNAFGGKRVKLARSQGKKVHITVEQEYARLLGNLAWAYLQQNDYKTAEEYYRKALSIEIDRNKQCNLAVCLMYMNRTAEAKFLLQVIRDSAPEGQMDESYAKSFDRAFQMLAEMEEGLPPGVQSSCQQQKENRLEQPIRNHVLPKSPLTQPRRDRIYYHNNPTSHSHRRLQFDKPFGGINIQKESCAIQEVHNRTIPEIDKQKNAETTDYSTQNEDEQEQDLLVYESKKSWADMVEEEEQELINELVTGENVDLNVIGSSQNPETPAENLSSKLQRCSLIDQPSVRRSLVFTQQQKEDQTNSNKRVFQDITP*

Click here to download the sequence:
Link to NCBI Protein BLAST