Transcript Information: S_Transcript_367235.p1


Annotated TAIR IDAT4G25580.1
Annotated Gene NameCAP160 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13056320-13058657 | Forward length=626
E-Value4.6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2885747121887
Replicate 20.26581674165681
Replicate 30.088880655824581
Condition 2: 8 Hour
Replicate 10.43678510288104
Replicate 20.21563227604556
Replicate 30.23113569692148
Condition 3: 24 Hour
Replicate 12.3950414429447
Replicate 21.8021826072758
Replicate 30.9724161698358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_367235.p1 GENE.S_Transcript_367235~~S_Transcript_367235.p1 ORF type:complete len:830 (+),score=239.61,CAP160|PF07918.7|4.2e-06,CAP160|PF07918.7|7.1e-07 S_Transcript_367235:138-2627(+)
ATGAACACTCAACTGGAACGCCCTAGAGGTCACACTTCTCATGAGGATGACCCCCATTTCAATGTTGCAAGTGAAGGTCATGATAGTGAGCATCATGGTGAGAAGAAATCAGTGCTGAAGAAAGTTAAAGCTAAGGCTAAGAAAATTAAGGAAACCATTAAAGGGCATGTTGGACATGGAAATGAGCTTGATCATGGTCATGAACATGATGAGGATGAGGATGATGAAATGGACACTGATCCTGAAGTTCATGATGCTCATACTTCTCAGAGCACCATATCAGGGCAACATGGAGCAGAAAGGCATCACGGAACCAAACTGGGAGAAAGAACTCCAACTGAAGAGGTGACTGATATGCCTGTGAGAGCTCCTGGTAGTCATCAGACCCATGATCCTGCTACAGCGGGATATATTCCAGGCACCCGTTTGCCAATAAGTGCTCCTGCTAGTGCTGCTGGTAGTGCTCCTGTTGCTGAATATCAGACATTTGATCCTACTAGTGTTAGCTACACTCCTGGGGATGAAGAGACTCTAGGCCGATCTAGAACCGATACAGGAGGGCCAAGATCTGATGAACGACCCTTTGGTGGACATCGCCATGCTGGGCCTATTGATGTTCTTGGCACGAGGGAACAAGATGCCAAATTCCCAATGGGGTCCGAGGAACAGTTTTTCACATCGAGCATGCCTGTTGCTGCTGCTTCGGGTGGAGTTCAAGGTGCTGGGCTTGACCTTGACAGTGTTCTTGGCACTGGAGAAACAGATATGCCAGATACTAGAAGGCCAGTAGGTTTCAAGGAACAACAGTATGCATTGAAGAACATGCCTGTTGCTGCTCTTTCTGGTGGAATTCATGGTGGCGGGTTTGACAGCGCTCTTGGCACTGGGGAACAAGATGCTCGAAGGCTGGCAAGGTCTGACGGCACGCCTGTTGGTGCCCATTCTGGTGGACTTCATGGTGCCGGGCATGACAGTATTCTCAGCATGGAGTCAGATACTAGAAGGGAGGAACGACCCTATGCACCTAAGAACACACCTGTCAATGTGCACTCTGATGGAGCCCACGGTACCAGTGTTCTTGGCACTGAAGGACTAGGTACAAGGATGGCCATTGGGTCTCAGGAACGACCCTATGAAGCTCATTCTGGTGGAGCTCATGGTGCCGATATCCTTGAAAGGGGTCATCAAGGATTTTCAGGAGAGATTGGGGGCGTAATTGAGAGAGCAGGAGACCTCCAAAAAGATCCTCATGCTCCAAAGGATCAAGGGGAAGCGCTTGATCCTGGAAATTACCAAACAAAGACCACAGACTTGACAGGCATTGATGCTCAAGAAGTATGTGTTACTCCGCTCCTGCATCATTTAGACATGATGAGAATCCATGAAGAATCAGACAAAAAATCAAGCACAGGCCAAGAAAAGATCCTGTCTAAACCAAGCCTAGGTCATGATCTCCCCACTTCAACTGGAGCATCAGATGAAAAACTATTCACAGGAAGCCATGATCAATTCTCCCCTGAGCCAATCACTTCTGAAACCAGTACTTTCCTTCAAGAACCCGAAACCCAGGCCCTTGGTGCCAATCGACCATGTGATCAGGGGTCACACGAGGAAGAGAAGAAACAAGGGAGCTACACTGAAAAGATGTCGTCAGCGGCCTCAATGGTGGCTGACAAAGCAAAGCAGGCCACGACAGCTGTTACGTCAAAGCTTGCATACGGTGGTGCCAGTACTGACCAGTCACCTACAGAATCCACAGAAGGACATGATCTGCAAAACAAACAACAGTCAGAGAAAGGGAGCTATGGAGAGACATTATCAAGTGTGACAGCAGCAATAGCTGACAAAGCCACACAAGTGAAAGATGATGTGGCCTCGAAGCTAGGCTATGGGGGAACAGCTCAAGAAGGAGAGTCAGAGCAAACCGCTGCGAGTGAAGAGCAACCGAAGGCAGGGTCCGAGGGGGGGCTTGGTAAGAAAGTGACCATAACTATGCAGGAGAAGCTAGCCCCGGTCTATGAGAAGGCAGCAGAGGTAGGGTCAACCTTGGCCTTGAAGATGCAAGGGTCTAAGACGGAGCATGGGATGGGGACCGCAACAAATGTGCCTGACAAGGGGGTTTCAGTGAAGGAGTATCTGGCCGAGAAGCTGAGGCCTAGTGAAGAGGACAAGGCATTGTCTCAGGTCATCACTGAAGTGTTGCCGTTGCACAAGCAAAAGGACGAGGCAACCAAGCAAGAAGAGGAAGGGAAGAAAGTTCTCACTAAAGGGCGAGTAACCGAGTCCGAGGAAGTGAGGAACAGGCTTGGCGGCTTCGACGAAATGAGTGACGAGAATGTCGGGTCAGGGGAAGCTAGTCCAAGGAGGGCTGTGTTTGACAGGATCAAAGATGCAGCTACTTCCTGGTTCGGCAAGGGTGGCGAGACGCAGCCGATAGCAAAAGGTTATATGGACACTTCAGAAGGAAAGCAAACTGAGAGGACACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_367235.p1 GENE.S_Transcript_367235~~S_Transcript_367235.p1 ORF type:complete len:830 (+),score=239.61,CAP160|PF07918.7|4.2e-06,CAP160|PF07918.7|7.1e-07 S_Transcript_367235:138-2627(+)
MNTQLERPRGHTSHEDDPHFNVASEGHDSEHHGEKKSVLKKVKAKAKKIKETIKGHVGHGNELDHGHEHDEDEDDEMDTDPEVHDAHTSQSTISGQHGAERHHGTKLGERTPTEEVTDMPVRAPGSHQTHDPATAGYIPGTRLPISAPASAAGSAPVAEYQTFDPTSVSYTPGDEETLGRSRTDTGGPRSDERPFGGHRHAGPIDVLGTREQDAKFPMGSEEQFFTSSMPVAAASGGVQGAGLDLDSVLGTGETDMPDTRRPVGFKEQQYALKNMPVAALSGGIHGGGFDSALGTGEQDARRLARSDGTPVGAHSGGLHGAGHDSILSMESDTRREERPYAPKNTPVNVHSDGAHGTSVLGTEGLGTRMAIGSQERPYEAHSGGAHGADILERGHQGFSGEIGGVIERAGDLQKDPHAPKDQGEALDPGNYQTKTTDLTGIDAQEVCVTPLLHHLDMMRIHEESDKKSSTGQEKILSKPSLGHDLPTSTGASDEKLFTGSHDQFSPEPITSETSTFLQEPETQALGANRPCDQGSHEEEKKQGSYTEKMSSAASMVADKAKQATTAVTSKLAYGGASTDQSPTESTEGHDLQNKQQSEKGSYGETLSSVTAAIADKATQVKDDVASKLGYGGTAQEGESEQTAASEEQPKAGSEGGLGKKVTITMQEKLAPVYEKAAEVGSTLALKMQGSKTEHGMGTATNVPDKGVSVKEYLAEKLRPSEEDKALSQVITEVLPLHKQKDEATKQEEEGKKVLTKGRVTESEEVRNRLGGFDEMSDENVGSGEASPRRAVFDRIKDAATSWFGKGGETQPIAKGYMDTSEGKQTERTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST