Transcript Information: S_Transcript_367964.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1462097770307
Replicate 20.62274002783308
Replicate 30.89239045565809
Condition 2: 8 Hour
Replicate 10.85989477085214
Replicate 20.90209067095672
Replicate 31.3752159745149
Condition 3: 24 Hour
Replicate 10.088084207623364
Replicate 20.2741590110042
Replicate 30.30510537586834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_367964.p1 GENE.S_Transcript_367964~~S_Transcript_367964.p1 ORF type:complete len:248 (+),score=25.72,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|7.1e+02,LRR_1|PF00560.29|0.82,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.8,LRRNT_2|PF08263.8|5.6e-08 S_Transcript_367964:56-799(+)
ATGGGAAGCTCCCCAAGCCTCTTCATGCACTTTCTCAAAACCTCTCTCATCCTCCTCTCATTCTTCACCATCTCCCAAGCTGAAATCGCATCCTGCCATCCAAAAGACCGAGCCATCCTCCTCCAAATCAAAGCCCACATCAAGAGCCCCGATTCGACCCATCTCGGCTCACTGGACACCTGGCAACCCGACTCAAACTGCTGCTTCTGGCCCTTCGTCGGGTGCACCACCGTCGAAAGCCCCCACCCGGGCCGTGTTAACGGCATCACCATAAGTGGCGGGAGTGGCCTCGCTGGCACGATCCCCGAGGTGATCGGGGACTTGCCTTTCCTAGAGGAGATCATGTTCTTCGACGAGCCAAAACTCACCGGCCCACTCCCAAAATCCTTGATCAAGCTCAAGAACCTTGAGCTCATCTATCTCAACTCCAACAGTCTCTCGGGAACTATCCCTAACTTTCTTGGCCAGCTTAAAAGACTTCGAGGGATCGATATATCGGATAACAAGTTTTCGGGCGTTATTCCGCCTTCGATTTCTAGCCTAGCCAAACTCACTTCCTTCAATGTGTCCCATAATATGTTGAAGGGTTCTGTCCCCACTATGCAGACTCTGAAACTGAAGGAGTTTGATGTTAGCTTTAACTTGCTTTGTGGGGTTATTCCTAGTGGGTTAAGGAAGCTTGATGCCAAGAAATTTGGGCATAATAAGTGCCTTTGTGGTCCTCCCTTGGCTGCTTGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_367964.p1 GENE.S_Transcript_367964~~S_Transcript_367964.p1 ORF type:complete len:248 (+),score=25.72,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|7.1e+02,LRR_1|PF00560.29|0.82,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.8,LRRNT_2|PF08263.8|5.6e-08 S_Transcript_367964:56-799(+)
MGSSPSLFMHFLKTSLILLSFFTISQAEIASCHPKDRAILLQIKAHIKSPDSTHLGSLDTWQPDSNCCFWPFVGCTTVESPHPGRVNGITISGGSGLAGTIPEVIGDLPFLEEIMFFDEPKLTGPLPKSLIKLKNLELIYLNSNSLSGTIPNFLGQLKRLRGIDISDNKFSGVIPPSISSLAKLTSFNVSHNMLKGSVPTMQTLKLKEFDVSFNLLCGVIPSGLRKLDAKKFGHNKCLCGPPLAACK*

Click here to download the sequence:
Link to NCBI Protein BLAST