Transcript Information: S_Transcript_368122.p1


Annotated TAIR IDAT1G02460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:504897-507099 | Reverse length=491
E-Value5.5E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39552231135088
Replicate 20.42158196606716
Replicate 30.27409586536137
Condition 2: 8 Hour
Replicate 10.31693786033956
Replicate 20.23749308534742
Replicate 30.45256576656011
Condition 3: 24 Hour
Replicate 10.13913938529041
Replicate 20.52930345507393
Replicate 30.37484991684886


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_368122.p1 GENE.S_Transcript_368122~~S_Transcript_368122.p1 ORF type:complete len:471 (+),score=61.72,Glyco_hydro_28|PF00295.13|2.3e-90,Pectate_lyase_3|PF12708.3|6.8e-07,Pectate_lyase_3|PF12708.3|0.019,Pectate_lyase_3|PF12708.3|1.8e+02,Beta_helix|PF13229.2|7.1e-06 S_Transcript_368122:444-1856(+)
ATGGAAACTCTCCATCTGAAATTGTCATTTTTGCACCTCTTTTTGATCACCACTAGTTGGCTTTTCTTAGGCTCTCAGGCCAGATACCACAAACACTCTTCCTTCAAACATCACAAGCACAGGCATTCTCCGACTTCAGGGTTTTCCCTCCCCCCTTCTCCTATCCCTGACGACCCTGCTGATGCACCTACTGTTGTTCCGAGTGGTGTTTTTGACGTCAAGAGTTTTGGGGCGGTTGGAGATGGCATTGCTGATGATACCGAAGCCTTCAAGGCGGCTTGGGATGCAGCTTGCAGTTGTACTGATACGGAATCTGTGGTGTTACAAGCCCCTGCTGGATATACCTTCATGATTCAGTCTACTATCTTCACAGGGCCTTGCCAAAGTGACTTATTAATCTTTCAGATTGATGGGTCTGTTGTGCCACCTGATGGGCCTGATTCATGGCCGAAGAGCATGAGTAAACGTCAGTGGCTGGTTTTCTACAGAGTCGAGGGAATGTCACTCCAAGGAGGCGGACGTATTGATGGAAGAGGACAAAAGTGGTGGGATCTTCCCTGCAAACCCCACAAGGGCGTGAATGGAACAACGGCGCCTGGTCCTTGTGATAGTCCAATTGCCATTCGATTCTTTGAGAGCTCCAACTTGACAGTAAAAGGACTTAGAATACAGAACAGCCCTCAGTTCCACTTCAGGTTTGATAGTTGTCACAATGTCCATGTAGAATCGATTTTCATAACCGCTCCAGCACTGAGTCCAAATACAGATGGAATCCACATTGAGAATACCAACAACGTTGAGATATATAATTCTGTCATCTCCAATGGGGATGACTGTATCTCAATTGGCTCTGGTTGCTATGATGTAGACATCAGAAACATGACTTGTGGACCTGGTCATGGCATCAGCATTGGGAGTCTTGGAAATCATAATTCGAGGGCGTGTGTTCACAATGTGACGGTGAGAGATTCCCTAATCAAGCTATCAAGCAACGGGGTGAGGATCAAGACGTGGCAAGGGGGATCAGGGGCTGTATCAGGTGTGACATTTGACAACATCCATATGGAAAATGTGAGGAACCCCATCATAATCGACCAGTTCTATTGCCTCGGCAAGGGATGCAACAACCAAAGCTCAGCAGTTTTTGTAAGTGACATTCAGTATTCCAACCTCAAGGGCACCTATGATATCAGGAGCCCTCCCATGCACTTTGCATGCAGTGATGCAGTTCCGTGTGCCAACATTACCCTTGCTGATATCGAGCTTCTCCCCTCCACCGGAGAAATGGTGTTGGACCCCTTCTGCTGGAATGTTTACGGAAACTTGCAGTCACTAACGATTCCACCTGTTTCCTGCTTGCTGGATGGCATCCCGCCACAGCCCATCTTAGATAGCAGTGTTGATCATTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_368122.p1 GENE.S_Transcript_368122~~S_Transcript_368122.p1 ORF type:complete len:471 (+),score=61.72,Glyco_hydro_28|PF00295.13|2.3e-90,Pectate_lyase_3|PF12708.3|6.8e-07,Pectate_lyase_3|PF12708.3|0.019,Pectate_lyase_3|PF12708.3|1.8e+02,Beta_helix|PF13229.2|7.1e-06 S_Transcript_368122:444-1856(+)
METLHLKLSFLHLFLITTSWLFLGSQARYHKHSSFKHHKHRHSPTSGFSLPPSPIPDDPADAPTVVPSGVFDVKSFGAVGDGIADDTEAFKAAWDAACSCTDTESVVLQAPAGYTFMIQSTIFTGPCQSDLLIFQIDGSVVPPDGPDSWPKSMSKRQWLVFYRVEGMSLQGGGRIDGRGQKWWDLPCKPHKGVNGTTAPGPCDSPIAIRFFESSNLTVKGLRIQNSPQFHFRFDSCHNVHVESIFITAPALSPNTDGIHIENTNNVEIYNSVISNGDDCISIGSGCYDVDIRNMTCGPGHGISIGSLGNHNSRACVHNVTVRDSLIKLSSNGVRIKTWQGGSGAVSGVTFDNIHMENVRNPIIIDQFYCLGKGCNNQSSAVFVSDIQYSNLKGTYDIRSPPMHFACSDAVPCANITLADIELLPSTGEMVLDPFCWNVYGNLQSLTIPPVSCLLDGIPPQPILDSSVDHC*

Click here to download the sequence:
Link to NCBI Protein BLAST