Transcript Information: S_Transcript_368479.p1


Annotated TAIR IDAT3G52260.3
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19383452-19386440 | Reverse length=416
E-Value3E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.985848919069
Replicate 22.5829607286847
Replicate 31.4394330601835
Condition 2: 8 Hour
Replicate 12.9127362384377
Replicate 23.164798100254
Replicate 34.3671492654108
Condition 3: 24 Hour
Replicate 13.3033726254069
Replicate 22.3216587468453
Replicate 32.3376528960839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_368479.p1 GENE.S_Transcript_368479~~S_Transcript_368479.p1 ORF type:complete len:205 (-),score=32.14,PseudoU_synth_2|PF00849.18|4.4e-11 S_Transcript_368479:43-657(-)
ATGCTAATGTTCAGTGGAGATAAACAACTGCTGAATAATATTTCTTATTTTCCAAAATCCAGAGAGATAAACTTAGAACTTCAAGTGGGGCGAAAGATTACCAAGATATATCGGGCACTAGTCAAGGGGATAGTAGATTTGGATGAGATTGTAATCAACCAGCCAATTGGAACAATGCGATATCCTGGTGTGGCAAGTGGTCTTTATGTTGCATTGCCCTCAGGTAAACCAGCATTGAGCAAAGTACAGGTCCTTGAAAGAGATCTAGAGAAAGATCAGACACTAGTCCAGGTGGAGATACAGTCAGGAAGGCCTCATCAAATCCGTATACATCTTTCTTTTATAGGGCATCCACTAATAGGTGATCCTCTTTATGTTGCTGGTGGTCAACCAAAGTGCTTCAACTCTGAATCAGTAGAAGAAAGTTTTGCGGAAGATGGGTATGGGAAGATGAACTTAAATAAAGGGATACGAGTGATGAATCTAATGCTGTCACTGCTTATCAGTTATCACCAGTGTTTGCCTCTTTCTTTGAAACTGTTCCAAATTGAATACATTGAGATGAAAGCCATTCATTATCAAGTTGGCAATGGTCAATTCGGGAAATTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_368479.p1 GENE.S_Transcript_368479~~S_Transcript_368479.p1 ORF type:complete len:205 (-),score=32.14,PseudoU_synth_2|PF00849.18|4.4e-11 S_Transcript_368479:43-657(-)
MLMFSGDKQLLNNISYFPKSREINLELQVGRKITKIYRALVKGIVDLDEIVINQPIGTMRYPGVASGLYVALPSGKPALSKVQVLERDLEKDQTLVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVAGGQPKCFNSESVEESFAEDGYGKMNLNKGIRVMNLMLSLLISYHQCLPLSLKLFQIEYIEMKAIHYQVGNGQFGKFA*

Click here to download the sequence:
Link to NCBI Protein BLAST