Transcript Information: S_Transcript_368888.p1


Annotated TAIR IDAT3G51040.1
Annotated Gene NameRTE1-Homolog
Annotated Gene Symbol(s)RTH
Annotation TypeHomolog
Chromosome Positionchr3:18952281-18953060 | Reverse length=231
E-Value5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3628365582637
Replicate 21.8557486543704
Replicate 33.1025163505122
Condition 2: 8 Hour
Replicate 14.6836137612395
Replicate 23.6589472074319
Replicate 32.1913488192037
Condition 3: 24 Hour
Replicate 15.9205758993199
Replicate 24.5539434475838
Replicate 31.6500402881852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_368888.p1 GENE.S_Transcript_368888~~S_Transcript_368888.p1 ORF type:complete len:214 (+),score=24.34,DUF778|PF05608.8|1.4e-20,DUF778|PF05608.8|9.7e-19 S_Transcript_368888:292-933(+)
ATGGCATCAGATGTAGACTCTGAGAAGCAGCAAATGGTCGGTGGAAATTTTCCAGAAGCTATGCAAATTGACCCAAAAAGAGCGCGATTCCCATTCTGTATTGTGTGGACACCACTACCTCTTCTTTCATGGCTGATTCCTTTCATTGGACACATTGGAATATGCAGACAGGATGGTGTAATATTGGACTTTGCAGGCCCCAATTTTGTGTCGGTAGATAACTTTGCCTTTGGTGCAGTTACTAGAAACATACGAATAGATGAAAAGAATCGTAGTGGAGCTGAAGGGGAGATACGGACTTGGGATGATGCACTGCGGAAAAGCACACAAGAATTCCAACATCGTTCATACAATATTTTGACTTGCAATTGTCATTCATTTGTGGCGCACAATCTAAATCGTCTGGGTTTCAATGGTGGCCGATGGAACGTGGTTAATCTTGCTATTCTGATGCTCTTAAAGGGTCAGTGGGTGGACAAAAGATCAATATTGAAATCTTACCTACCGTTTGTCATAGTATTTCCAATGGGTCTTGCTCTTGGAGGATGGACTTTCCTAGAATTTTGGGCTGCATTTTTGGTCCTCCTTGTTGGTTGGTTTTTTATTGGTTCTTATGGTTTCCAAGGTTTGATCCAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_368888.p1 GENE.S_Transcript_368888~~S_Transcript_368888.p1 ORF type:complete len:214 (+),score=24.34,DUF778|PF05608.8|1.4e-20,DUF778|PF05608.8|9.7e-19 S_Transcript_368888:292-933(+)
MASDVDSEKQQMVGGNFPEAMQIDPKRARFPFCIVWTPLPLLSWLIPFIGHIGICRQDGVILDFAGPNFVSVDNFAFGAVTRNIRIDEKNRSGAEGEIRTWDDALRKSTQEFQHRSYNILTCNCHSFVAHNLNRLGFNGGRWNVVNLAILMLLKGQWVDKRSILKSYLPFVIVFPMGLALGGWTFLEFWAAFLVLLVGWFFIGSYGFQGLIQL*

Click here to download the sequence:
Link to NCBI Protein BLAST