Transcript Information: S_Transcript_369082.p1


Annotated TAIR IDAT2G32630.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13844834-13846708 | Forward length=624
E-Value2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0134836460827
Replicate 21.5240742786441
Replicate 32.3660089054619
Condition 2: 8 Hour
Replicate 13.086569651164
Replicate 23.3116223315385
Replicate 33.1553063888953
Condition 3: 24 Hour
Replicate 12.5868940975704
Replicate 21.9383523058718
Replicate 32.3230830373133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_369082.p1 GENE.S_Transcript_369082~~S_Transcript_369082.p1 ORF type:3prime_partial len:304 (-),score=71.32,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|2e-13,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|2.9e-16,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.0013,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.012,PPR|PF01535.16|49,PPR|PF01535.16|0.0087,PPR|PF01535.16|0.0025,PPR|PF01535.16|7.6e-08,PPR|PF01535.16|4e-08,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.0006,PPR_1|PF12854.3|15,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|8.6e-08,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|1.9e-07,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|1.4 S_Transcript_369082:1-843(-)
ATGGCTTCAATTGTGCAAAAATGCGGCCAAAGTGGTAGAATTGTAGAAAAATTTTATGATATGCTGATGAGGGTTTGTGCAGATAATAGACAATTTGATTATGCCTTCCAGGTGTTTGACTATATGACTGAAAGTGGGTTTGATATTGAGGAGAGGTCTTGTATGGTTTGTTTGGTTGCTATGAAGAGGGCTGGGGAATTTGAGTTGGTAATCAAGTTTTTTACTAAGATGGTTGACTTGGCTGTTGAGATAACTGTGTATTCATTGTCTCTTGTGATTGATTGCTTGTGCAAGGGAGGGGAGGTTGAGAAGGCTAAACAATTGATGTCTGAAGTTGGTAAATGTGTTAACCCAAATGTGTATGCATACAACTCATTGTTAGAGTTTTATGTTAGAAAGCATGAGTTTGAGGAAGCTGATGGAGTATTAAAGCTAATGGAGAAAGCAAATGTAGCACCCAATGCTGCAACTTATACAATCCTTATTGATGGGTATACCAATGATGGGAAGATTGAAGAGGCTGAGAAAATGTATGTGAAGATGTGTGAAAAAGGTAAGGAGGGAGATGTGCATTTGTACACAGCAATGATCAATCTTTTTTGTAGGAAAGAAGATATGAAGAGAGCATGTAGTCTGTTTGATGAAATGGTTGAGAAAGGCCTTTATCCGAGTGCTCACAGTTATGGGGCTTTGGTAAATGGTTTATGCAAAGCTGGGCAGTTGGAGGCTGCTGAGACACTTGTAAATGAGATGCAAAGCAAAGGGCTGAATTTGAATAAGGTGATATTTAATACTTTGATAGATAATTATTGCAAAAGAGGAATGATCAACGAAGCACTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_369082.p1 GENE.S_Transcript_369082~~S_Transcript_369082.p1 ORF type:3prime_partial len:304 (-),score=71.32,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|2e-13,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|2.9e-16,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.0013,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.012,PPR|PF01535.16|49,PPR|PF01535.16|0.0087,PPR|PF01535.16|0.0025,PPR|PF01535.16|7.6e-08,PPR|PF01535.16|4e-08,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.0006,PPR_1|PF12854.3|15,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|8.6e-08,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|1.9e-07,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|1.4 S_Transcript_369082:1-843(-)
MASIVQKCGQSGRIVEKFYDMLMRVCADNRQFDYAFQVFDYMTESGFDIEERSCMVCLVAMKRAGEFELVIKFFTKMVDLAVEITVYSLSLVIDCLCKGGEVEKAKQLMSEVGKCVNPNVYAYNSLLEFYVRKHEFEEADGVLKLMEKANVAPNAATYTILIDGYTNDGKIEEAEKMYVKMCEKGKEGDVHLYTAMINLFCRKEDMKRACSLFDEMVEKGLYPSAHSYGALVNGLCKAGQLEAAETLVNEMQSKGLNLNKVIFNTLIDNYCKRGMINEALK

Click here to download the sequence:
Link to NCBI Protein BLAST