Transcript Information: S_Transcript_369336.p1


Annotated TAIR IDAT5G56310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22802322-22803914 | Forward length=530
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63871202964433
Replicate 20.70600926584047
Replicate 31.6229607753569
Condition 2: 8 Hour
Replicate 11.3648249802965
Replicate 21.9687226802959
Replicate 32.2168481509181
Condition 3: 24 Hour
Replicate 11.2233134754733
Replicate 21.0878629556647
Replicate 33.0266453286139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_369336.p1 GENE.S_Transcript_369336~~S_Transcript_369336.p1 ORF type:internal len:125 (+),score=32.95,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00051,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|4.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.002,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|11 S_Transcript_369336:3-374(+)
GCTTGTGCTCAGGAAGGGTGTTTAATGATAGGGGAAAGGATTGAGAAGTTCCTGAAAGAGAGAGGGGTTGAGTTGGGGGTGATTCTTGGGACTGCGTTAGTTGACATGTATGCAAAGAATGGAGCTGTGAATAAGGCTATGGAGGTGTTTGGTGCTATGCAAGAGAAGAATGTTGCGACATGGAATGCCATGATTCATGGGTTAGCTGTTCATGGGCATGGTGCCGAAGCTCTGAAACTTTTCGGGAAGCTTGAGATAGACGGAATCACTCCTAATGGCATTACATTTGTTGCGGTGTTATCTGCTTGTTGCCATGGCGGCTTCCTTGAAGAAGGCCGTGAGTTTTTTCATTCAATGAGGATATATCACAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_369336.p1 GENE.S_Transcript_369336~~S_Transcript_369336.p1 ORF type:internal len:125 (+),score=32.95,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00051,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|4.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.002,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|11 S_Transcript_369336:3-374(+)
ACAQEGCLMIGERIEKFLKERGVELGVILGTALVDMYAKNGAVNKAMEVFGAMQEKNVATWNAMIHGLAVHGHGAEALKLFGKLEIDGITPNGITFVAVLSACCHGGFLEEGREFFHSMRIYHN

Click here to download the sequence:
Link to NCBI Protein BLAST