Transcript Information: S_Transcript_37019.p1


Annotated TAIR IDAT2G42700.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17778464-17782034 | Forward length=867
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.294895307481
Replicate 213.26347816674
Replicate 312.9207004843
Condition 2: 8 Hour
Replicate 118.706482734327
Replicate 217.845147102098
Replicate 317.975118272739
Condition 3: 24 Hour
Replicate 113.336876236363
Replicate 212.299425229737
Replicate 311.858785790476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37019.p1 GENE.S_Transcript_37019~~S_Transcript_37019.p1 ORF type:complete len:855 (+),score=185.96,Sec1|PF00995.19|0.0017,Sec1|PF00995.19|3.3e-05 S_Transcript_37019:187-2751(+)
ATGTCAACTATAGATGTAATCAAGTCCTCTCTTGATTGCATTCTTCAGATATCAGAGCACCTCAAGGGAGCTGTTGTGTACCTTGATGCTGGATGCACAGAGAGTTTCCAATTTCTTGGAGCATTTCCTTTGTTGTTGGAACATGGAGCACGCGCTGTTTGCTGCTTGGAGAACATGTCTTCCCTTGATGTGGTTGCTGATTGGAATGGAAGCTCCGAATTAGCAAAGAAAGTCGTGGTTATGACATCATCCCTTTTAAGTGATTCCCACCGGTATATCTTACGCTGCCTCAGGTCACAGCCAAGTGTACAGTGCTGTTACATATTCACATCTATCTCAGAGATGGCACACTCAGCATATCCTGATTCACCCCTGGGTCCAGATGCATTTCGGGAGTATGAATCATTGTTGATCCAAGATTATGAGGAACTTGCAAATAAGCGCAGGACAAAATCTGAACAGTTGGGTGGAAAAGTGGTGTCAGAAGATTTGACCTTTGAAGAGGAAGGATGGGCAGAGCTTGATGAGACAGACATTTCTCGTGTGGTCACTAGTTCTACTTCAGAATCTGTCTATGAAGAGAATCCTAAGGATAAAGAACAAAAGTTCGTGGTGTCAGTTCAGCACATCCCTATGATATTATGTCCTTTATCACCAAAAGTTTTTGTTTTACCGTCAGGGGGATTAGTTGCCCAAGCTTCGTTGTCATCTGAGCACGAGGATTCACTCAGCCCTGGTTTGCCTCCACTCAGCAAGGGAGTAGCTTCTAATGGTGAAGATGTCCCTGGGGCAACTTTTACAGCTCATTTTCTCTACCATCTGGCTTCTAAGATGGATCTAAAGTTGGAAATATTTTCCTTTGGGGACCTATCCAAAACAATTGGAAGGATGTTAACAGACATGTCAAGTCTCTATGATGTAGGACGATGCAAAAGATCAGCTGGTTTATTGCTGATTGATCGCACTGTGGATCTTCTGACCCCCTGTTGTCATGGTGATTCATTCTTTGATCGCATATTCTCTGCATTGCCTCGTAAAGGAAAATCAGTATTCCCTGCATATGCAAAAACCTCACAAGCTCATGCAAAGTCTGGTTCTTCTCGCTTACAGCGTGCATCTCTTGATGTTCAGGTACCACTTGGCAATGTTGTTGATAAAGATTCAAGAGCTGATAACTTTCAGTTACTTGAGGGCATTGAATCTCTTCTTTGTGGGTGGGCTTCTAGCAGTTCTGCTTCAAAGATTCAGGACCTAGTTAACCTAGGTGCCAAAATTCAAGATGAGAAGTCCTTTAACTCCCTAGGTCATCTGTTTAATGGTTCATTTGTAGCTGCTGAGAATTTTCGTGGAACACCTTATTTGGAAGCCGTATTGGATAGAGGAATGAAGGATGGGGCAGTACTTGTTAAAAAGTGGCTACAAGAAGCCTTGCGCAAGGAAAAGATATCGGTGAATGTGAAAGCTCGTCCGGGGTCTGCTACAAAGTCAGAGTTGGAACCTATTCTAAAGGCTCTGGTTAAAAGCGATTCCTCTTTACTAAGAAACAAAGGTATTATTCAGTTGGCTTCAGCAGCACTGGCTGCTTTAGATGAATTACATGGCGACAAATGGGATGCATTTATCAGTGCAGAGAAAATGTTACATGTTTCTGCTGGTGACACAAGTCAAAGTCTTTCTGCTCAAATAGGTGATTTGATTAACAAAAGCATTTTAGCTGGATCTCAAGGTGGAAAATCCAACTATTCCCACGGATTAATTTCTTTTAAAGATGCCTTACTCCTGACAATCATCGGATATATCCTGGCGGGTGATAATTTTCCGACAACAGGATCAACAAGTCCATTCTCTTGGCAGGAGGAACATTTATTGAAAGAAGCTATTGTTGATGCTATTTTTGAGAATCCAGAATTAGCAAAACTCAAGTTTGCTCATGGTCTTGCTGAGGAGCTTGAGGCATACAGGAATAAGGTCAGTTTACAAGAAAAGAAGCCGAAGGAAGAATTATCAATTGATGATTTTGATGACGATCAGTGGGGTAACTGGGGTGATGAAGATGCTGACAATGCTAGTAATAAAGACCAAATATATGATGACATGCAGCTTAAACTAGAGTTGCGTGACAGGATTGACAATCTTTTTAGATTCTTGTACAAATTATCTGGTTTAAAGAGTAGATATAAACCATTGAGGGAAGGCCCCTTTGCCTCAGAAATTGGTATTGGAAGTGATTCCTATGAAAGTAAAGGATTGCTGTACAAGTTATTAGTGACGGCATTGGACAAACAGGAAGTACCTGGCTTAGAGCATCATTCTTCAGCTGTGGGGAGACTTTTTAAAAGTGGGTTTGGAAGATTTGGCCTTGGCCAGGCAAAACCTAGTCTTGCAGACTACAATGTTATCCTCGTTTTTGTTGTAGGAGGCATCAATGGCCTAGAGGTACGTGAAGCTCTCGAGGCATTGTCTGAAAGTGGGAGGCCAGATATTGATCTTATCGTTAGTGGCACAACACTTCTAACCCCTGATGACATGTTTGAGTTATTGCTGGGTAACTCCAGTTACTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37019.p1 GENE.S_Transcript_37019~~S_Transcript_37019.p1 ORF type:complete len:855 (+),score=185.96,Sec1|PF00995.19|0.0017,Sec1|PF00995.19|3.3e-05 S_Transcript_37019:187-2751(+)
MSTIDVIKSSLDCILQISEHLKGAVVYLDAGCTESFQFLGAFPLLLEHGARAVCCLENMSSLDVVADWNGSSELAKKVVVMTSSLLSDSHRYILRCLRSQPSVQCCYIFTSISEMAHSAYPDSPLGPDAFREYESLLIQDYEELANKRRTKSEQLGGKVVSEDLTFEEEGWAELDETDISRVVTSSTSESVYEENPKDKEQKFVVSVQHIPMILCPLSPKVFVLPSGGLVAQASLSSEHEDSLSPGLPPLSKGVASNGEDVPGATFTAHFLYHLASKMDLKLEIFSFGDLSKTIGRMLTDMSSLYDVGRCKRSAGLLLIDRTVDLLTPCCHGDSFFDRIFSALPRKGKSVFPAYAKTSQAHAKSGSSRLQRASLDVQVPLGNVVDKDSRADNFQLLEGIESLLCGWASSSSASKIQDLVNLGAKIQDEKSFNSLGHLFNGSFVAAENFRGTPYLEAVLDRGMKDGAVLVKKWLQEALRKEKISVNVKARPGSATKSELEPILKALVKSDSSLLRNKGIIQLASAALAALDELHGDKWDAFISAEKMLHVSAGDTSQSLSAQIGDLINKSILAGSQGGKSNYSHGLISFKDALLLTIIGYILAGDNFPTTGSTSPFSWQEEHLLKEAIVDAIFENPELAKLKFAHGLAEELEAYRNKVSLQEKKPKEELSIDDFDDDQWGNWGDEDADNASNKDQIYDDMQLKLELRDRIDNLFRFLYKLSGLKSRYKPLREGPFASEIGIGSDSYESKGLLYKLLVTALDKQEVPGLEHHSSAVGRLFKSGFGRFGLGQAKPSLADYNVILVFVVGGINGLEVREALEALSESGRPDIDLIVSGTTLLTPDDMFELLLGNSSYF*

Click here to download the sequence:
Link to NCBI Protein BLAST