Transcript Information: S_Transcript_370501.p1


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85161603952578
Replicate 21.4120185316809
Replicate 31.0327932206816
Condition 2: 8 Hour
Replicate 11.1942218577594
Replicate 21.4317983129425
Replicate 31.0231606850391
Condition 3: 24 Hour
Replicate 11.7475906792475
Replicate 20.54393147783234
Replicate 30.60532906572279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_370501.p1 GENE.S_Transcript_370501~~S_Transcript_370501.p1 ORF type:internal len:125 (+),score=28.34 S_Transcript_370501:1-372(+)
TCGACTATTAAGAGTCGCATGAAAACAGATCAATATGATGGGAAGGGCTTGATCCGCCGTGTTGGAAGCCTTCCAACAAGTCAAAAACAATCTATGACATCTCGTTCTATGAATGACATAAAAATTCTTCGTGAGATTGTCCAAATAAAAACATCCGAAAACTCTAATTCTGTAAATACGCTGCGTGAGAAGTTTGATGAGGCAAAGTCAGTGGTGGATGAAAATTGTGAAATTGCAGTGTCTCTGGATGATTCCAAGCTTCTAAAACAAGCTTCCTGCTCTCCATCAGATTCATCTAAGGGACACATAGTTGATGAGAATGGTAAGTGTGAAATTCCTGAGTCTCTAGATGATACCAAGTCTCTAAAACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_370501.p1 GENE.S_Transcript_370501~~S_Transcript_370501.p1 ORF type:internal len:125 (+),score=28.34 S_Transcript_370501:1-372(+)
STIKSRMKTDQYDGKGLIRRVGSLPTSQKQSMTSRSMNDIKILREIVQIKTSENSNSVNTLREKFDEAKSVVDENCEIAVSLDDSKLLKQASCSPSDSSKGHIVDENGKCEIPESLDDTKSLKP

Click here to download the sequence:
Link to NCBI Protein BLAST