Transcript Information: S_Transcript_37215.p1


Annotated TAIR IDAT2G39260.1
Annotated Gene Namebinding;RNA binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16392288-16399588 | Reverse length=1181
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.161327744342
Replicate 212.053350831854
Replicate 311.768222072393
Condition 2: 8 Hour
Replicate 113.792265425886
Replicate 214.178522254788
Replicate 313.730727807884
Condition 3: 24 Hour
Replicate 115.244135145817
Replicate 212.950749472199
Replicate 313.255221605113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37215.p1 GENE.S_Transcript_37215~~S_Transcript_37215.p1 ORF type:complete len:1155 (+),score=306.21,MIF4G|PF02854.15|6.3e-08,MIF4G|PF02854.15|1.2e-30,MIF4G|PF02854.15|7.2e-40,Upf2|PF04050.10|1.3e+04,Upf2|PF04050.10|1.6e+04,Upf2|PF04050.10|7e-41 S_Transcript_37215:404-3868(+)
ATGGAACTTCGTCAAAGTAACTTGAAGCCTGAAAGACCTGATCCCGCTTTCCTGAGGACACTAGATTCCAGCATAAAGCGCAACACTGCAGTTATCAAAAAACTTAAACAGATAAGTGAAGACCAGAGGGAAGGTTTAATGGATGAGTTACGAAGTGTCAATCTGAGCAAATTCGTGACTGAGGCAGTGGCTGCCATATGTGATGCTAAGCTTAAAACTTCAGACATACTAGCGGCAGTTCAGATTTGTTCTCTGCTTCATCAAAGGTACCAAGACTTCTCATCAAGCCTGTCTCAGGGGCTTTTGAAAGTGTTCTTCCCAGGAAAAGCAGCAGAAGACTTGGAGATAGACAGGAACTCAAAGGCCATGAAGAAGCGGAGTACTCTAAAGCTCCTTTTGGAACTGTATTTTGTCGGTGTTATAGAAGATAGTAGTATTTTTGTAAATATCATCAAAGATCTTACTAGTGTAGAACACCTTAAGGACAGAGAAGCTACTCAGACCAATTTGTCCCTTCTTGCTACCTTTGCTCGGCAAGGCAGAGTTTTTCTTGGGCTTCCGCTGTCTGGACCAGAATATAATGAAGAGTTCTTCAAGGGCCTTAATATTACAGCAGATCAGAAAAAGAATTTCAAGAAAGTGTTTCATGCATATTATGATGCTGTTAACGAGGTTCTGCAGGCTGAGCATACTTCTCTTCGGCAAATGGAGCATGAGAATGCAAAAATTTTGAATGCTAAAGGTGAGCTGAGTGATGATAATGCTGCCGCATATGAGAAGTTGCGAAAGTCCTATGACCATTTGTATCGGGGTGTCTCATCGTTAGCTGAAGCACTTGATATGCAACCACCAGTAATGGCTGAGGATGGGCATACAACCAGAGTAACAAGTGGGGATGATGGTGCATACCCTGGTGGTGGGAAGGAGTCTTCTAATGTTGAAGCAATTTGGGATGATGAAGATACAAGGGCTTTTTATGAATGCTTGCCAGATCTCAGAGCTTTTGTGCCTGCAGTTTTGTTGGGTGAAGCTGAACCCAAGGCTGGTGAGCAGTCTGCAAAGATGCAAGACCATTCTACTGATCCTATCAGTGAATCTGATCAGTGTCAAACGGCTAGTGAGGATGTTGTTGAGTCCTCTGCGGATTCTGGAGTGCTGCAAGATGGGAAATCCAATGAGAAAGGGAAGGATAAAGAAGGCAAGGGGAAGGAAAGTAACGACAAAGAAAAGGTAAAAGATGCAGAGAAAGAGAAAGGGAAGGAAAAAGATGCAGATAAAAAAGGAGATAAGGAAAAACACAAAGGTCTTGATGGAACTAATCTGGACACATTATTGCAGAGGCTTCCGGGTTGTGTCAGCCGTGACCTTATTGATCAGTTATCTGTAGAATTTTGTTATTTGAACTCGAAGTCTAATCGGAAAAAACTTGTGAGGGCATTGTTCAATGTCCCTAGGACTTCTCTAGAGTTGCTGCCATATTACTCGCGTATGGTTGCTACACTGTCTACTTGTATGAAGGATATCTCTTCAATGCTCCTGCAGATGTTGGAAGAGGAGTTCAATTTCTTGATAAATAAGAAGGATCAAATGAACATTGAAACAAAGATCAGGAATATCAGATTCATTGGAGAACTGTGCAAATTTAAAATTGCATCAGCTGGTCTTGTATTTAGCTGTTTAAAGGCTTGTTTGGATGATTTTACTCATCATAATATAGATGTGGCCTGCAATCTATTGGAAACATGTGGTCGATTCTTATACCGTTCTCCTGAAAGTACCATAAGAATGGCTAACATGTTGGAGATATTGATGCGCTTGAAAAATGTGAAGAATTTGGATCCTCGTCATAGCACACTCGTTGAAAATGCTTATTATTTGTGCAAACCACCAGAAAGACCTGCCAGAGTTGCTAAAGTTCGACCTCCTCTGCATCAGTATATTAGAAAATTGCTGTTCTCAGATCTGGACAAGTCATCAATCGAACATGTACTAAGACAGCTCCGTAAATTACCATGGACTGAATGCGAGCCATATCTGTTGAAGTGCTTTTTGAAGGTTTATCGGGGGAAATATGGGCAAATTCATTTGATTGCATTGCTAACAGCTGGTCTTAGTCGCTACCATGATCATTTCGCTGTTTCTGTTGTGGACGAGGTTTTGGAGGAGATCAGGGTAGGGCTAGAGTTGAATGATTATGGGATGCAGCAACGACGCCTTGCACACATGCGTTTCTTAGGGGAGCTGTACAATTATGAACATGTGGACTCATCTGTTATCTTTGATACACTGTATTTGATTCTTGCATTTGGTCATGGAACAGCTGAGCAAGATGTTTTGGATCCTCCTGAAGACTGTTTCCGCATTAGGATGGTGATTACACTTCTTGAGACCTGTGGACACTACTTTGCCCGAGGTTCCTCCAAACGGAAACTAGATCGTTTTCTGATACATTTCCAGAGATATATCCTAAGCAAGGGAGTGCTGCCACTTGATATTGAGTTTGACTTACAGGATCTGTTTGCTGATCTGCGGCCAAATATGTCACGCTATACCTCAATTGAGGATGCCAATGCTGCTCTTGCAGAACTAGAGGAGCATGAGGGTAAAGTCAGTAGTGAAAAGCAGTCTGAGACTGAGAAACGTTCGAACAGTATTGCTCGAAACAATCTAGCTAATGGTCAACGCCACTCAAATGGTGTTGATGAAAATGGCGGTGCACATGACGATGCAATAGGAGATAGTGAGACTGAGTCAGGCAGTGGCTCTATTGGTCATGATGAAGATGATGACTTGGATGATGAGGATCATGATGCTGGGAGTGAGAGTGATAACGATGAGGATGAAGGGATCGGACCTGGTTATGATGAAGACGGGGAAATACATGTCAGACAGAAGGCACCAGATCTGGACCCCAAGGAAGAAGCTGAATTTGACAGGGAGCTCAAGGCTCTTATGCAGGAGAGCTTAGACTCCCGTAAACTGGAGCTGAGGGCCAGGCCAACACTCAACATGATGATTCCAATGAGTGTTTTTGAGGGTTCCTCAAAGGACCATCATGGAAGAGGGGTTGAAGGGGAGAGTGGAGACGAGACATTGGATGACGAAGATGGAGGAAATAGGGAGGTTCGTGTGAAAGTTCTCGTAAAGCGTGGGCACAAGCAACAGACTAAACAGATGTACATTCCTCAGGATTGCTCTCTTGTGCGGATCTCAAAGCAGAAAGAAGCTGCTGAGCTCGAGGAGAAGCAGGACATAAAGAGGTTGGTGTTGGAATACAATGACCGAGAAGAAGAGGAGCTTAATGGGGGTGTTGGTAATCAAATCATGGGATGGTCACAAAGTGGGATTGGTAGGATGCCTAACCGTGGTAGCTCTTGGGATGGAAGTGGTGGGAAAAGTTCCGGGTCACGTCATCGACACCACCATTATTCGGGCGGTGGGTATTACTATAGTAGAAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37215.p1 GENE.S_Transcript_37215~~S_Transcript_37215.p1 ORF type:complete len:1155 (+),score=306.21,MIF4G|PF02854.15|6.3e-08,MIF4G|PF02854.15|1.2e-30,MIF4G|PF02854.15|7.2e-40,Upf2|PF04050.10|1.3e+04,Upf2|PF04050.10|1.6e+04,Upf2|PF04050.10|7e-41 S_Transcript_37215:404-3868(+)
MELRQSNLKPERPDPAFLRTLDSSIKRNTAVIKKLKQISEDQREGLMDELRSVNLSKFVTEAVAAICDAKLKTSDILAAVQICSLLHQRYQDFSSSLSQGLLKVFFPGKAAEDLEIDRNSKAMKKRSTLKLLLELYFVGVIEDSSIFVNIIKDLTSVEHLKDREATQTNLSLLATFARQGRVFLGLPLSGPEYNEEFFKGLNITADQKKNFKKVFHAYYDAVNEVLQAEHTSLRQMEHENAKILNAKGELSDDNAAAYEKLRKSYDHLYRGVSSLAEALDMQPPVMAEDGHTTRVTSGDDGAYPGGGKESSNVEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKAGEQSAKMQDHSTDPISESDQCQTASEDVVESSADSGVLQDGKSNEKGKDKEGKGKESNDKEKVKDAEKEKGKEKDADKKGDKEKHKGLDGTNLDTLLQRLPGCVSRDLIDQLSVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDISSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIASAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPESTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERPARVAKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWTECEPYLLKCFLKVYRGKYGQIHLIALLTAGLSRYHDHFAVSVVDEVLEEIRVGLELNDYGMQQRRLAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHGTAEQDVLDPPEDCFRIRMVITLLETCGHYFARGSSKRKLDRFLIHFQRYILSKGVLPLDIEFDLQDLFADLRPNMSRYTSIEDANAALAELEEHEGKVSSEKQSETEKRSNSIARNNLANGQRHSNGVDENGGAHDDAIGDSETESGSGSIGHDEDDDLDDEDHDAGSESDNDEDEGIGPGYDEDGEIHVRQKAPDLDPKEEAEFDRELKALMQESLDSRKLELRARPTLNMMIPMSVFEGSSKDHHGRGVEGESGDETLDDEDGGNREVRVKVLVKRGHKQQTKQMYIPQDCSLVRISKQKEAAELEEKQDIKRLVLEYNDREEEELNGGVGNQIMGWSQSGIGRMPNRGSSWDGSGGKSSGSRHRHHHYSGGGYYYSRRK*

Click here to download the sequence:
Link to NCBI Protein BLAST