Transcript Information: S_Transcript_372218.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.49212439193384
Replicate 20.34418228676502
Replicate 30
Condition 3: 24 Hour
Replicate 10.33607513062453
Replicate 20
Replicate 30.1940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372218.p2 GENE.S_Transcript_372218~~S_Transcript_372218.p2 ORF type:3prime_partial len:130 (+),score=11.42,gag_pre-integrs|PF13976.2|1.5e-14 S_Transcript_372218:1148-1534(+)
ATGCATCGTGGTACATGGATTCTGGCGCTACTGCTAATCTCACTAACTCCCCAGGATTTAAAGACACAGAAGCAAATTCTCAGATGTGATAGTCAAGGAGACCTCTACCCCATCACACAACAACTCAAAGAGCGCCCTTCATCTTCCTCCGCCTTCATTAGTGTCACCCCATCACGATGGCATGCGAGATTGGGTCATCCATGTCCTCCAGTTCTAAACTCTTTAGTCTCTGATGGTTTAATTTCTTGTAATAAGGCGGCTAGCTCCACAGTTTGCCATTCTTGTCAATTAGGGAAGCATGTCAAACTTCCTTTTACTATTTCACAATCTAGTTGTTCAGCTCCTTTTGATGTAATTCATGCAGACTTATGGACATCTCCAATTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372218.p2 GENE.S_Transcript_372218~~S_Transcript_372218.p2 ORF type:3prime_partial len:130 (+),score=11.42,gag_pre-integrs|PF13976.2|1.5e-14 S_Transcript_372218:1148-1534(+)
MHRGTWILALLLISLTPQDLKTQKQILRCDSQGDLYPITQQLKERPSSSSAFISVTPSRWHARLGHPCPPVLNSLVSDGLISCNKAASSTVCHSCQLGKHVKLPFTISQSSCSAPFDVIHADLWTSPIP

Click here to download the sequence:
Link to NCBI Protein BLAST