Transcript Information: S_Transcript_372224.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18481250857764
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.78693790195651
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372224.p1 GENE.S_Transcript_372224~~S_Transcript_372224.p1 ORF type:internal len:144 (+),score=-7.07,AAA|PF00004.25|1.5e-05,AAA|PF00004.25|1.5e+03 S_Transcript_372224:3-431(+)
AAGACAGAATTCATCATCGGCGCGACCAACCGGCCCGACATCATCGACCCCGCCCTCATGCGCCCCGGCCGCCTCGACCAGCTCATCTACATCCCGCTGCCGGACCAGGGCAGCCGGCGCGCGATCTTCAAGGCCGTCCTGCGCAAGTCCCCCGTCGCCGGCGACGTCGAGGTCGACGCGCTGGTGAGCAACACTGAGGGCTTCTCCGGCGCGGACATCACCGAGATCTGCCAGCGCGCGTGCAAGGCCGCGATCCGGGAGAGCATTGAGAAGGACATCGAAAAGGAGCGCGCACGGGCGGCGGACCCCAATGCGATGGACACCGAGGGCACTGGCGCTGATGAGGAGGATGACAAGGACAATGTGCCCTGCATCACCCGTGGCCACTTTGAGGAGGCGATGAAGCACGCGCGGCGCAGCGTGTCGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372224.p1 GENE.S_Transcript_372224~~S_Transcript_372224.p1 ORF type:internal len:144 (+),score=-7.07,AAA|PF00004.25|1.5e-05,AAA|PF00004.25|1.5e+03 S_Transcript_372224:3-431(+)
KTEFIIGATNRPDIIDPALMRPGRLDQLIYIPLPDQGSRRAIFKAVLRKSPVAGDVEVDALVSNTEGFSGADITEICQRACKAAIRESIEKDIEKERARAADPNAMDTEGTGADEEDDKDNVPCITRGHFEEAMKHARRSVSQ

Click here to download the sequence:
Link to NCBI Protein BLAST