Transcript Information: S_Transcript_372312.p1


Annotated TAIR IDAT3G48930.1
Annotated Gene NameNucleic acid-binding, OB-fold-like protein
Annotated Gene Symbol(s)EMB1080
Annotation TypeOrtholog
Chromosome Positionchr3:18141017-18142189 | Reverse length=160
E-Value1.3E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.67677268581334
Replicate 30.11314562014479
Condition 2: 8 Hour
Replicate 10.26166123088507
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.1123343104956
Replicate 30.15473646874304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372312.p1 GENE.S_Transcript_372312~~S_Transcript_372312.p1 ORF type:5prime_partial len:163 (+),score=-1.80,Ribosomal_S17_N|PF16205.1|2.6e-29,Ribosomal_S17|PF00366.16|3.7e-27 S_Transcript_372312:3-491(+)
AGGCATCGCCCAAACATGGCTGACCACCAGAATGAGAGGGCGTTTCAGAAGCAGGTGGGCGTGAACCAAGGGTTCCGCAAGCCTGTCAAGCGGGTACCAGGCAAGTTTGGCCAGCGGTACTACAAAAACATTGGCCTGGGCTACCGCACGCCCAAGTCAGCCATCGAAGGCACGTACATCGACAAGAAGTGCCCCTTCACCGGCAATGTGTCCATCCGCGGCCGCATCATGGCGGGCACGGTCAAGTCGACCAAGATGACGCGCACGATCATCGTGCGCCGCAACTACTTCCACTTCATCCCCAAGTACCAGCGGTACGAGAAGCGGCACAGCAACACGCCGGCGCACATCTCGCCGTGCTTCCGCTGCAAGGAGGGCGACAATGTCATCATCGGCCAGTGCCGGCCGCTGAGCAAGACGGTGCGCTTCAACGTGCTCAAGGTCATCCCGCAGGGCACGAGCATCAAAAAGGGCTTCAGCGAGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372312.p1 GENE.S_Transcript_372312~~S_Transcript_372312.p1 ORF type:5prime_partial len:163 (+),score=-1.80,Ribosomal_S17_N|PF16205.1|2.6e-29,Ribosomal_S17|PF00366.16|3.7e-27 S_Transcript_372312:3-491(+)
RHRPNMADHQNERAFQKQVGVNQGFRKPVKRVPGKFGQRYYKNIGLGYRTPKSAIEGTYIDKKCPFTGNVSIRGRIMAGTVKSTKMTRTIIVRRNYFHFIPKYQRYEKRHSNTPAHISPCFRCKEGDNVIIGQCRPLSKTVRFNVLKVIPQGTSIKKGFSEF*

Click here to download the sequence:
Link to NCBI Protein BLAST