Transcript Information: S_Transcript_372332.p1


Annotated TAIR IDAT5G39670.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15883270-15883884 | Forward length=204
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46689475851194
Replicate 20.25804432231011
Replicate 30.3235567733965
Condition 2: 8 Hour
Replicate 10.49883953958206
Replicate 20.52331809683571
Replicate 30.87257855692906
Condition 3: 24 Hour
Replicate 10.38324357001042
Replicate 20.1325369098032
Replicate 30.4424920071073


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372332.p1 GENE.S_Transcript_372332~~S_Transcript_372332.p1 ORF type:complete len:171 (+),score=30.34,EF-hand_1|PF00036.28|4.6e+02,EF-hand_1|PF00036.28|8.6e-06,EF-hand_1|PF00036.28|0.00056,EF-hand_6|PF13405.2|2.5e+02,EF-hand_6|PF13405.2|1.6e-06,EF-hand_6|PF13405.2|0.16,EF-hand_7|PF13499.2|2.4e+02,EF-hand_7|PF13499.2|1.7e-08,EF-hand_8|PF13833.2|0.041,EF-hand_8|PF13833.2|6.8e-05,EF-hand_5|PF13202.2|1.2e+03,EF-hand_5|PF13202.2|1.3e-05,EF-hand_5|PF13202.2|3.3e+02 S_Transcript_372332:84-596(+)
ATGGTGTGGGCTTTGTTTTCACAAGTTAGTGAAGAAACAATGTGTTTGTTCAATTCCAAAACCCTCAACTGGCTTTCATCTTTACTCATCTCCTTCTTTGGTCGATCCAATATGACTAATACTGCTACTGTAATTACAAGGCCGATTAAAAACCATGAGAAATTAGAGGAGATGAGTAATATCAGTGTGAATGAGCTAAATATGGTGATGAGGAGACTGGGAATGATGAGCTGCGAGACAGTTGAGGCAACCAAGGATGATTTCGAGGGTTTGTTTAAGGAAGAAGAGCCAAGTTTGGAGGAAATAAGGGAAGTTTTTAAGGTGTTTGATGGAAATAGAGATGGCTTCATTGATGCTGTTGAGTTAAGCAGAGTGCTCTGTAGGTTGGGTTTCGTCAAAGAAGGTTCAAATGTTGATAAGTGTAAGAAAATGATTCAGGGTTTTGATAGAAATCGTATTGGCTTATTGGATTTTAATGACTTCATTAAGTTTATGGAAAAATGCCTATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372332.p1 GENE.S_Transcript_372332~~S_Transcript_372332.p1 ORF type:complete len:171 (+),score=30.34,EF-hand_1|PF00036.28|4.6e+02,EF-hand_1|PF00036.28|8.6e-06,EF-hand_1|PF00036.28|0.00056,EF-hand_6|PF13405.2|2.5e+02,EF-hand_6|PF13405.2|1.6e-06,EF-hand_6|PF13405.2|0.16,EF-hand_7|PF13499.2|2.4e+02,EF-hand_7|PF13499.2|1.7e-08,EF-hand_8|PF13833.2|0.041,EF-hand_8|PF13833.2|6.8e-05,EF-hand_5|PF13202.2|1.2e+03,EF-hand_5|PF13202.2|1.3e-05,EF-hand_5|PF13202.2|3.3e+02 S_Transcript_372332:84-596(+)
MVWALFSQVSEETMCLFNSKTLNWLSSLLISFFGRSNMTNTATVITRPIKNHEKLEEMSNISVNELNMVMRRLGMMSCETVEATKDDFEGLFKEEEPSLEEIREVFKVFDGNRDGFIDAVELSRVLCRLGFVKEGSNVDKCKKMIQGFDRNRIGLLDFNDFIKFMEKCLC*

Click here to download the sequence:
Link to NCBI Protein BLAST