Transcript Information: S_Transcript_37252.p1


Annotated TAIR IDAT3G11640.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3674501-3675061 | Forward length=186
E-Value2.5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3456344409941
Replicate 24.1604117451314
Replicate 33.1616119000458
Condition 2: 8 Hour
Replicate 16.7022655282418
Replicate 24.8578871331978
Replicate 36.821071233594
Condition 3: 24 Hour
Replicate 12.8710418301924
Replicate 25.3098072836014
Replicate 33.7472751687601


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37252.p1 GENE.S_Transcript_37252~~S_Transcript_37252.p1 ORF type:5prime_partial len:175 (+),score=18.41 S_Transcript_37252:3-527(+)
CAAATCTCCCAATCTCTCAATCTTCTTCAAAACCCCATCATCCAAAAAAAATTCTCCCTTCTAAAACCTCCAAAAAAAAAAAAAAAACCCACCAAAAATTTTAAAAAAAGAAAAAAAAAAATGACCAAGTTGAGCAAACTAGGAATTATTCTAACTTCACTCTTCTCATTCCTCCTCTTAGCTCTCCTAGCCGAGATCCTCTACCTTGTATGGCGCCGACGCAACCAAAAACGGACCCGGGTCGAGCCCGCCGGGTCTGGCCCCCGTGACCCGGGTGTTATGAGAAACTTGTCGGACTCAGAAGGGCTTAAACTTGATGGGCTTTATGGCCCATCAAGGGTTTTGTTCACCATCAAAGAAGAAGAAGCAGAAAAAGAAGAGGGTGAAAATGGAGAAGTTGTTAATATTATGGTGGTTGGTTTTTCATCAGAGTATGAAGTTGAAGAACCACCGTTCTTAACGCCTTGTGGGTCCCCACCTTATTACACTCCTTCGTCTTCTCCGTCAAGGGATTGTAGAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37252.p1 GENE.S_Transcript_37252~~S_Transcript_37252.p1 ORF type:5prime_partial len:175 (+),score=18.41 S_Transcript_37252:3-527(+)
QISQSLNLLQNPIIQKKFSLLKPPKKKKKPTKNFKKRKKKMTKLSKLGIILTSLFSFLLLALLAEILYLVWRRRNQKRTRVEPAGSGPRDPGVMRNLSDSEGLKLDGLYGPSRVLFTIKEEEAEKEEGENGEVVNIMVVGFSSEYEVEEPPFLTPCGSPPYYTPSSSPSRDCRK*

Click here to download the sequence:
Link to NCBI Protein BLAST