Transcript Information: S_Transcript_372740.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.14052732202239
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14249585120845
Replicate 30.27153945993607
Condition 3: 24 Hour
Replicate 10.13913938529041
Replicate 20.14435548774744
Replicate 30.32129992872759


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372740.p1 GENE.S_Transcript_372740~~S_Transcript_372740.p1 ORF type:internal len:157 (+),score=17.60,PIF1|PF05970.10|9.6e-38 S_Transcript_372740:3-470(+)
CGTGCAAAGGAAGATCCGAAGTTCACTGACTTCCTATTGCATCTAGGGAATGGACAATTACAAAAGCAAGAAAATGTAGAGATTGAGTTACCAGAGTCACTTATATCTAAACTCCCCAAAAGTGATGACTGCTTGCAGCACCTCGTTCAATCTGTGTATCCAGACATCCATGAACTTGCAGCAAATCCACATGGCTTTACATCACGCGCAACATTAACTCCAACCAATGATGAAGTGGATTGCATCAACAAGCTGATGATAGACAATTTCCCTGGCGAACGACACCAGTACAGAAGCTTTGATACTACTATTGATGATGACTGCAATGCACACCCAGTAGAATTCTTGAATACTCTATGTCCAGGAGGGATGAGCCCACATAATTTAATATTGAAGCTCAATTGCCCAGTAATATTGCTACGGAATCTAAATCCATCAGTTGGATTATGCAACGGAACAAGGCTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372740.p1 GENE.S_Transcript_372740~~S_Transcript_372740.p1 ORF type:internal len:157 (+),score=17.60,PIF1|PF05970.10|9.6e-38 S_Transcript_372740:3-470(+)
RAKEDPKFTDFLLHLGNGQLQKQENVEIELPESLISKLPKSDDCLQHLVQSVYPDIHELAANPHGFTSRATLTPTNDEVDCINKLMIDNFPGERHQYRSFDTTIDDDCNAHPVEFLNTLCPGGMSPHNLILKLNCPVILLRNLNPSVGLCNGTRLI

Click here to download the sequence:
Link to NCBI Protein BLAST