Transcript Information: S_Transcript_372776.p1


Annotated TAIR IDAT3G27030.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9972508-9974225 | Reverse length=142
E-Value4.8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27721876286646
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.22213948247014
Replicate 20.4660801799943
Replicate 30.22204007921856
Condition 3: 24 Hour
Replicate 10.22755086969369
Replicate 20.94432548234781
Replicate 30.26272962921996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_372776.p1 GENE.S_Transcript_372776~~S_Transcript_372776.p1 ORF type:5prime_partial len:96 (+),score=0.10,DUF3339|PF11820.4|1.7e-30 S_Transcript_372776:2-289(+)
TCAGAGACTCTTACAACCAGGCCCATAAACCAAATAAGGTCCAAATTATACAAAGTATTTGAATTTGAATTGATAATAATGCTGGATTGGGGACCGGTTTTGATAGGGGTGTTACTATTCATACTGCTCTCCCCGGGGGTGTTGTTCCAGCTGCCAGGAAATGAACGTCACCTTCAATTTGGGGGCTTCAAGACCAATGGCAAGGCCGTCATTGTACACACACTCATTTTCTTTATTGTCTTTACCATTCTTATCATGGCTCTTGGTATCCACATTTATGTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_372776.p1 GENE.S_Transcript_372776~~S_Transcript_372776.p1 ORF type:5prime_partial len:96 (+),score=0.10,DUF3339|PF11820.4|1.7e-30 S_Transcript_372776:2-289(+)
SETLTTRPINQIRSKLYKVFEFELIIMLDWGPVLIGVLLFILLSPGVLFQLPGNERHLQFGGFKTNGKAVIVHTLIFFIVFTILIMALGIHIYVG*

Click here to download the sequence:
Link to NCBI Protein BLAST