Transcript Information: S_Transcript_37310.p1


Annotated TAIR IDAT1G78570.1
Annotated Gene Namerhamnose biosynthesis 1
Annotated Gene Symbol(s)RHM1, ROL1, ATRHM1
Annotation TypeOrtholog
Chromosome Positionchr1:29550110-29552207 | Forward length=669
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.469708869863
Replicate 250.531959490249
Replicate 339.235213357112
Condition 2: 8 Hour
Replicate 136.079401099505
Replicate 233.872636014519
Replicate 338.905369258277
Condition 3: 24 Hour
Replicate 142.427618157287
Replicate 250.296873690916
Replicate 344.876556045251


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37310.p1 GENE.S_Transcript_37310~~S_Transcript_37310.p1 ORF type:complete len:675 (+),score=138.03,GDP_Man_Dehyd|PF16363.1|4e-70,GDP_Man_Dehyd|PF16363.1|0.00013,Epimerase|PF01370.17|2.2e-54,Epimerase|PF01370.17|2e-11,RmlD_sub_bind|PF04321.13|1.3e-15,RmlD_sub_bind|PF04321.13|6.2e-14,3Beta_HSD|PF01073.15|6.5e-24,3Beta_HSD|PF01073.15|0.013,Polysacc_synt_2|PF02719.11|1.1e-19,Polysacc_synt_2|PF02719.11|0.00026,NAD_binding_4|PF07993.8|6.1e-19,NAD_binding_4|PF07993.8|0.13 S_Transcript_37310:375-2399(+)
ATGTCTACATACACCCCAAAAAACATCCTCATCACTGGTGCGGGGGGATTCATTGCATCCCATGTCGCAAACCGACTCATCAGGAGTTACCCGGATTACAAGATTGTCGTGCTTGACAAGCTTGACTATTGCTCAAACCTGAAGAACCTGCGTCCCTCTCAATCGTCCCCAAACTTCAAATTTGTCAAGGGGGACATTGCTAGTGCTGATCTTGTGAACTACTTGCTTATCACTGAATCCATTGATACAATTATGCACTTTGCTGCTCAAACCCATGTTGATAATTCTTTTGGTAATAGCTTTGAGTTTACCAAGAACAACATTTATGGGACTCACGTCCTCCTAGAAGCCTGTAAGGTCACTGGTCAGATTCGGAGGTTTATCCATGTGAGTACTGATGAAGTCTATGGGGAGACGGATGAGGATGCCGTTGTTGGGAACCATGAGGCTTCGCAGCTTCTCCCAACAAACCCTTACTCTGCAACAAAAGCTGGTGCTGAAATGCTTGTAATGGCTTATGGCAGATCATACGGTTTGCCTGTCATTACAACCCGAGGTAACAATGTGTATGGACCTAATCAATTTCCCGAGAAATTGATCCCAAAGTTTATTCTTTTGGCCATGAGGGGAAAGCCTCTCCCAATTCATGGAGATGGAGCTAATGTGCGAAGCTATCTCTACTGTGAGGATGTTGCTGAGGCATTTGAGTGTATTCTCCACAAGGGAGAAGTTGGTCATGTGTACAACATTGGTACGAAGAAGGAAAGGAGAGTGATTGATGTTGCTCGGGACATATGCAAACTGTTCTCAATGGATCCTGAGGCCAGTATTAAGTTTGTTGAGAACCGGCCATTTAATGACCAGAGGTATTTCCTTGATGATCAGAAACTGAAAAACTTAGGATGGTCAGAGCGCACCACTTGGGAAGAGGGGCTGAAGAAGACAATGGAGTGGTATACCAGCAACCCTGATTGGTGGGGTGATGTCTCAGGAGCGTTGCTTCCACACCCTCGAATGTTGATGATGCCTGGTGGTATTGAGAGACATTTTGAAGAATCTGATGACAGCAAGTCTGGCTCTTCGGAGTTCCCCAACACTCAGACTCGCATGGTGGTACCTGTTTCTAAGAGCAGCACTTCTCCTCGTAAATCATCTTACAAGTTCCTGATCTATGGTAGAACTGGTTGGATCGGTGGTCTACTTGGCCAGTTGTGTGAGAAGCAAGGTATTCCTTATGAGTATGGAAAAGGTCGTCTGGAGAACCGAGCAACTCTTATTGCAGATATCCAGAATGTCAAGCCTACTCATGTCTTCAATGCTGCTGGTGTGACTGGTAGACCAAATGTCGATTGGTGTGAATCTCACAAAACAGAGACAATTCGCACCAATGTTGCTGGTACATTGACTTTGGCTGACGTCTGCAAGGAGCACGGCATTCTTATGATCAACTATGCAACTGGGTGCATATTTGAATATGATGCTACCCATCCACTTGGTTCTGGAATTGGGTTCAAGGAGGAAGACAAACCCAATTTCACTGGATCTTTCTACTCAAAGACTAAAGCCATGGTGGAGGAGCTTCTGAAAGAGTTTGACAATGTTTGCACCCTTAGGGTTCGGATGCCCATCTCCTCCGACCTCAACAACCCACGTAATTTTATCACAAAGATCTCTCGCTACAATAAGGTGGTTAACATTCCCAACAGCATGACCGTCTTGGATGAGCTCCTACCTATTTCCATCGAGATGGCAAAGAGGAACCTCAGGGGAATTTATAACTTCACTAATCCAGGAGTGGTCAGCCACAACGAGATTCTTGAAATGTACAAGAATTACATGGACCCCAACTACACCTGGAAAAACTTCACCCTTGAAGAGCAAGCCAAGGTTATCGTTGCTCCAAGAAGCAATAATGAGATGGATGCCTCCAAGTTGAAAGCAGAATTCCCAGAATTGCTAAGCATCAAGTACTCACTGATCAAGTATGTCTTTGAGCCAAACAAGAAGACAAATTATTCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37310.p1 GENE.S_Transcript_37310~~S_Transcript_37310.p1 ORF type:complete len:675 (+),score=138.03,GDP_Man_Dehyd|PF16363.1|4e-70,GDP_Man_Dehyd|PF16363.1|0.00013,Epimerase|PF01370.17|2.2e-54,Epimerase|PF01370.17|2e-11,RmlD_sub_bind|PF04321.13|1.3e-15,RmlD_sub_bind|PF04321.13|6.2e-14,3Beta_HSD|PF01073.15|6.5e-24,3Beta_HSD|PF01073.15|0.013,Polysacc_synt_2|PF02719.11|1.1e-19,Polysacc_synt_2|PF02719.11|0.00026,NAD_binding_4|PF07993.8|6.1e-19,NAD_binding_4|PF07993.8|0.13 S_Transcript_37310:375-2399(+)
MSTYTPKNILITGAGGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLRPSQSSPNFKFVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGANVRSYLYCEDVAEAFECILHKGEVGHVYNIGTKKERRVIDVARDICKLFSMDPEASIKFVENRPFNDQRYFLDDQKLKNLGWSERTTWEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGGIERHFEESDDSKSGSSEFPNTQTRMVVPVSKSSTSPRKSSYKFLIYGRTGWIGGLLGQLCEKQGIPYEYGKGRLENRATLIADIQNVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCKEHGILMINYATGCIFEYDATHPLGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIYNFTNPGVVSHNEILEMYKNYMDPNYTWKNFTLEEQAKVIVAPRSNNEMDASKLKAEFPELLSIKYSLIKYVFEPNKKTNYSA*

Click here to download the sequence:
Link to NCBI Protein BLAST