Transcript Information: S_Transcript_37328.p1


Annotated TAIR IDAT1G03790.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)SOM
Annotation TypeOrtholog
Chromosome Positionchr1:954589-955770 | Forward length=393
E-Value3.7E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.733527701134
Replicate 212.68786619921
Replicate 39.1919068020501
Condition 2: 8 Hour
Replicate 116.147340272078
Replicate 211.793466535319
Replicate 312.871230662433
Condition 3: 24 Hour
Replicate 132.523053375773
Replicate 224.908470230874
Replicate 327.156003081547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37328.p1 GENE.S_Transcript_37328~~S_Transcript_37328.p1 ORF type:complete len:313 (+),score=-3.14,zf-CCCH|PF00642.20|52,zf-CCCH|PF00642.20|8.9e-06,zf-CCCH|PF00642.20|2.2e+02,zf-CCCH|PF00642.20|4.3e+03 S_Transcript_37328:307-1245(+)
ATGATGATCGGAGAGACACACCGTCACCACCAAAGCCACGGGCCGCCCTGGCAGTTACCAGACCCAATTCCAACACCACCGAACGACGAAGTACTGGCTTCATTAAGACGATACCTCCTTTCCACCTCCTCCGAAGACGCCGACTTCTCTGGCGACTTCGACTTCCCGGCGGAAGACGATGACGAGTTCTTCATGTACGAGTTCAAGGTCAGGAAGTGCACCCGGGCCCGGGCCCACGACTGGACCGAGTGCCCGTTTGCTCATCCGGGCGAAAAGGCCCGGAGGCGCGACCCGAGGAAGTACAGTTATTCGGGTACTGCGTGCTCCGATTTCCGTAAGGGCGGGTGTAAGAAGGGCGACGCCTGTGAGTTCGCTCATGGTGTTTTTGAGTGTTGGCTTCACCCCTCTCGGTACCGGACCCAGGCTTGTAAGGACGGGCCCGGGTGCAAGCGCCGGGTTTGTTTCTTCGCCCACTCCCCTGACCAGATTCGGGCCGGATCGGGCCTCGTCGGGAGCCCGAGGAGCGACAGCTCCGACGGGGTCGGGTCCGTGGGGGATCTCGTGGCCTCGATGAGGAACCTGCAGCTGAGTAAGGTCAAGTCCATGCCCACGAGCTCCGTGTGGGCAGCTGGTTCACCTGTCTTCGGGTCCCCGAGAGTCGGGTCGGTCAGTCGGGCCGGATTCCTCAGCTTGCCCGCCACCCCAACCCGGCGCGGGATCGGGTTCCTGGACTGGGGGGATAATAATAATAACAATAAGAAGGGTGAGGAGGAGGAGGGGGGTGTGGTTATGGAAAGGGTGGAATCCGGCCGGGAGCTCCGGGCCAGGATGTTCGAGAAGCTGAGCATGGAGAATCCGCTGAATGGGCCCAGCCTGGTTGCGGGGTCAGGCCCGGCGCAGGGGCCTGATCTTGGGTGGGTGTCTGATCTCATAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37328.p1 GENE.S_Transcript_37328~~S_Transcript_37328.p1 ORF type:complete len:313 (+),score=-3.14,zf-CCCH|PF00642.20|52,zf-CCCH|PF00642.20|8.9e-06,zf-CCCH|PF00642.20|2.2e+02,zf-CCCH|PF00642.20|4.3e+03 S_Transcript_37328:307-1245(+)
MMIGETHRHHQSHGPPWQLPDPIPTPPNDEVLASLRRYLLSTSSEDADFSGDFDFPAEDDDEFFMYEFKVRKCTRARAHDWTECPFAHPGEKARRRDPRKYSYSGTACSDFRKGGCKKGDACEFAHGVFECWLHPSRYRTQACKDGPGCKRRVCFFAHSPDQIRAGSGLVGSPRSDSSDGVGSVGDLVASMRNLQLSKVKSMPTSSVWAAGSPVFGSPRVGSVSRAGFLSLPATPTRRGIGFLDWGDNNNNNKKGEEEEGGVVMERVESGRELRARMFEKLSMENPLNGPSLVAGSGPAQGPDLGWVSDLIT*

Click here to download the sequence:
Link to NCBI Protein BLAST