Transcript Information: S_Transcript_37343.p1


Annotated TAIR IDAT1G09820.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3190594-3192414 | Reverse length=606
E-Value5.2E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9365064327038
Replicate 24.5964144911489
Replicate 33.957503784606
Condition 2: 8 Hour
Replicate 14.7537849248609
Replicate 25.1268819799373
Replicate 35.8174500755262
Condition 3: 24 Hour
Replicate 16.9175464386881
Replicate 25.7131691682042
Replicate 34.8867711034912


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37343.p1 GENE.S_Transcript_37343~~S_Transcript_37343.p1 ORF type:3prime_partial len:480 (+),score=101.58,PPR_2|PF13041.2|6.6e+02,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|8.6e-19,PPR_2|PF13041.2|6.5e-16,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|2.3e-16,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|9.2e-16,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|4.6e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|6.9e-12,PPR_1|PF12854.3|3.4e-11,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|4.5e-13,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|5.2e-06,PPR_1|PF12854.3|7.3e-12,PPR|PF01535.16|79,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.072,PPR|PF01535.16|0.00048,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|8e-09,PPR|PF01535.16|0.00023,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|2.5e-05,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|2.7e-06,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.83,MRP-S27|PF10037.5|0.23,MRP-S27|PF10037.5|1.1,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|0.17,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|1.8e+02,ATP13|PF12921.3|7.2,ATP13|PF12921.3|8.6,ATP13|PF12921.3|14,ATP13|PF12921.3|1.5e+02,ATP13|PF12921.3|6.1e+02 S_Transcript_37343:78-1439(+)
ATGGATTCTGAGACTGATCCAATTGTTATTATTCAGTATTTTAGGTGGTTAGAGAGAGAAGTTGGTGTCTTGCATAGTGTTGATATGTATTGTAAGTTGTTCCATTTGTTGGGTAATGGGGGTTTGTATGGGCAAATTAGGAAATTGCTAAATGGGTTTGTAAAGAATGGGAAGTACTCGAGTTCAGAGATTTTTCATAGGCTTTCACTGTTTGGCGAATCGTTTCGAGCTAATTCGGTTCTTGTTGATATGTTGGTGGTTGCATATGTGAATAATTCTGAGGTCGGATTGGCACTTGAAGCTGTGAAGAGGGCTTGGGATTACGGGTTTAGGTTGTCGGCTTTGTCGTGTAATCCGTTGCTAAGTGCATTGGTTGATCAAGGTAGGATAAAAGATATGGAGGATGTGTTTAAGGGGATGATTAGGAAAAGGATTCGACCTGATCTAATAACGTTTAATACGGTCATTAGTGGGTTTTGTAAGGTTGGTCAATTGCAAAAGGCGGGTGACCGATTGGAGGATATCAAAGCTTGGGGTTTTTCTCCGACTGTGGTGACGTATAATGCTTTGATTAATGGGTACTGCAAGAAGGGAAGGGTTGGGAAGATGTATAAAGCTGATGCTTTGTTGAGAGAAATGGTGTCGATGAACATTTGTCCGAATGAAATCACCTACAATACTCTTATTGATGGGTTTGGTAAGGATAATAACTTGCCTGCTGCTATGAAGGTGTTTGATGAAATGCAGAGTCGAGGGTTAAAACCTAGTGCTGCCACATTCAATGCATTGATCAGGGGGTTTTGTTCTGATGGGAAGATTGATGATGCTATAGGTTTGCTAAATGTCATGTCTATTATGGGTGTAGAGCCAGATATTGTTACATATAATATCCTTATCAATGGTTATGCTAAGAAGGGAATGTTACAAGAAGCTAGAAAGTTGTTGGCTGATGCTGATGGAAAGGGTTTGGTGCCCACTGTTATAACTTTCAATACCATAATTGACGCTTACTGCAAAGCCGGGATGATGGATGAAGCTGTTGCATTGCAGGAGTTAATGAAGAAGAGGAATCTTTGCCCTGATATTTCAACTTATAACTGCTTGATAGGTGGCTTCTACAGAAATGGAGATTTTCAAGCAGGTGATGATCTTGTAAACAAAATCAAGGAAATGGGGCATAAACCTGAGACAGTGACATATAACATAAGGGCTGGTGCTCTCTGCCAGAAAGGTGAGACAAGAAATGCAGTTCAGCTGTTAAATGAAATGTTGGAGATGGGTTTGACTCCAAATCATGTGACCTACAATACCTTGATTGATGGCTACTGTAGGGAAGGAAATCTTGGGGCTGCTATGACTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37343.p1 GENE.S_Transcript_37343~~S_Transcript_37343.p1 ORF type:3prime_partial len:480 (+),score=101.58,PPR_2|PF13041.2|6.6e+02,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1.4e-15,PPR_2|PF13041.2|8.6e-19,PPR_2|PF13041.2|6.5e-16,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|2.3e-16,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|9.2e-16,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|4.6e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|6.9e-12,PPR_1|PF12854.3|3.4e-11,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|4.5e-13,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|5.2e-06,PPR_1|PF12854.3|7.3e-12,PPR|PF01535.16|79,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.072,PPR|PF01535.16|0.00048,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|8e-09,PPR|PF01535.16|0.00023,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|2.5e-05,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|2.7e-06,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.83,MRP-S27|PF10037.5|0.23,MRP-S27|PF10037.5|1.1,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|0.17,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|1.8e+02,ATP13|PF12921.3|7.2,ATP13|PF12921.3|8.6,ATP13|PF12921.3|14,ATP13|PF12921.3|1.5e+02,ATP13|PF12921.3|6.1e+02 S_Transcript_37343:78-1439(+)
MDSETDPIVIIQYFRWLEREVGVLHSVDMYCKLFHLLGNGGLYGQIRKLLNGFVKNGKYSSSEIFHRLSLFGESFRANSVLVDMLVVAYVNNSEVGLALEAVKRAWDYGFRLSALSCNPLLSALVDQGRIKDMEDVFKGMIRKRIRPDLITFNTVISGFCKVGQLQKAGDRLEDIKAWGFSPTVVTYNALINGYCKKGRVGKMYKADALLREMVSMNICPNEITYNTLIDGFGKDNNLPAAMKVFDEMQSRGLKPSAATFNALIRGFCSDGKIDDAIGLLNVMSIMGVEPDIVTYNILINGYAKKGMLQEARKLLADADGKGLVPTVITFNTIIDAYCKAGMMDEAVALQELMKKRNLCPDISTYNCLIGGFYRNGDFQAGDDLVNKIKEMGHKPETVTYNIRAGALCQKGETRNAVQLLNEMLEMGLTPNHVTYNTLIDGYCREGNLGAAMTM

Click here to download the sequence:
Link to NCBI Protein BLAST