Transcript Information: S_Transcript_37377.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value9.8e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.799073920053
Replicate 270.600926584047
Replicate 385.330328525383
Condition 2: 8 Hour
Replicate 179.693151531585
Replicate 279.0237110219
Replicate 374.588682485462
Condition 3: 24 Hour
Replicate 146.71708941768
Replicate 243.828599394889
Replicate 349.29221591614


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37377.p1 GENE.S_Transcript_37377~~S_Transcript_37377.p1 ORF type:complete len:635 (+),score=132.97,HMGL-like|PF00682.15|2.8e-89,LeuA_dimer|PF08502.6|2.3e-35 S_Transcript_37377:141-2045(+)
ATGGCTACCACCATTTCAACCACCCCAACAATCTCCCAAACAAAACCCATAAAAAACCCCACCTTTCCAAGAACCCCATTCACCAATCTCCTCTCCTTACACTCCCCCAAAAAACCCAGTTTTTCCCACCTCTCATTCACCACCAAAACCCCCAAACAACCCACTTCCCTTACAAGATGTTCTTCAAACCCAAACCCACCACAAACCCGACCCAAATACATCCCAAACCAAATCCCGGACCCGAATTACATCCGGATCTTTGACACCACCCTTAGAGATGGGGAACAATCCCCTGGTGCTTCAATGACTCCCAACCAAAAACTTGACATAGCTAGACAGTTATCCAAGCTTGGGGTTGACATCATTGAGGCTGGTTTTCCTGCAGCTTCTAATGCTGATTTGGAAGCTGTGAAAGCCATTGCAATGGAAGTTGGTAATGATGTGGATGAGAATGGTTATGTGCCTGTAATTTGTGGGCTTTCTAGGTGTAATAAAGGTGACATTGATGCTGCTTGGGAAGCTGTTAAGTATGCTAAGAGGCCTAGGATTCATACCTTTATTGCTACTAGTGAGATTCATATGATGCATAAGCTGAATAAGACTAGAGAGGAAATTGTTGAGATTGCTAGGAGTATGGTTAAATATGCTAGGAGTTTGGGTTGTGATGATGTTGAGTTTAGCCCTGAGGATGCTGGCAGATCGGATAGGGAGTTTCTGTATCATATTCTAGGAGAAGTTATCAAGGCAGGGGCAACTACTCTAAATATTCCCGATACTGTAGGTTATACTGTCCCGGAAGAGTTTGGTAAATTGATTGCCGATATAAAGGCCAACACTCCTGGAATTGAGAATGTGATAATCTCAACACACTGTCAGAATGACCTTGGGCTCTCTACTGCAAACACGGTTGCTGGGTCATGTGCTGGTGCAAGGCAATTAGAAGTAACAATTAATGGAATTGGTGAAAGAGCTGGAAATGCTTCACTGGAAGAGGTTGTCATGACCTTAAAATGTCGTGGGCAATCACTCGGGGAACTATACACCGGGATTTGGACAGAACACATTGTTAAGGCCAGCAAAATGGTGGCTGAGTACAGTGGACTTCTTGTACAGCCTCATAAGGCCATAGTCGGAGCGAATGCTTTTAAGCATGAAAGTGGAATTCACCAGCATGGAATGCTAAAACACAAAGGTACATATGAGATCATGTCTCCTGAAGATATAGGGCTTCAGCGAGCTGATGAATCCGGTCTTGTTCTTGGGAAACTTAGTGGACGTCATGCATTGCAAAAAAGACTTGAGCAGATGGGTTACTCCTTTGAGGGCAAGGAACTTGACAACATCTTTTGGCGCTTCAAATCTGTTGCTGAAAAGAAAAAACATGTTCTGGATGAGGACATTGAAGCCTTAGTAATTGATGAGGTTTACCAGCCAGATTCTGTGTGGTCACTTGGTGATCTCCAGGTTACTTGTGGAACTCTTGGACTGTCAACAGCAACAGTTAAGCTCATAGACGCTGAAGGGAAGGAACATGTCGCTTGTTCTGTTGGAACAGGTCCAGTGGACTCGGCTTACAAAGCTGTTGATCTCATTGCGAAGGTGCCCGTTACTCTGCTTGAGTACTCCTTGTCAGCGGTGACGGAAGGCATAGACGCCATAGCTACGACCAGGGTCTTGATCAGGGGCAATGATGGTGTCACATCAACTCATGCTAGTGGTGACAAAATTCTACGAACATTTAGTGGGAGTGGATCTGAAGTGGATGTGGTTGTCTCAAGCGTCCGGGCCTATGTCAGTGCCTTAAACAAGATGCTAGGTTACAAGAAGAAACCTAGCCAGAAAGGTTCGGCTGGGAATTCCCATGTAACGGCTTCTGTAGACGAGCCTGCTGCCACTTCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37377.p1 GENE.S_Transcript_37377~~S_Transcript_37377.p1 ORF type:complete len:635 (+),score=132.97,HMGL-like|PF00682.15|2.8e-89,LeuA_dimer|PF08502.6|2.3e-35 S_Transcript_37377:141-2045(+)
MATTISTTPTISQTKPIKNPTFPRTPFTNLLSLHSPKKPSFSHLSFTTKTPKQPTSLTRCSSNPNPPQTRPKYIPNQIPDPNYIRIFDTTLRDGEQSPGASMTPNQKLDIARQLSKLGVDIIEAGFPAASNADLEAVKAIAMEVGNDVDENGYVPVICGLSRCNKGDIDAAWEAVKYAKRPRIHTFIATSEIHMMHKLNKTREEIVEIARSMVKYARSLGCDDVEFSPEDAGRSDREFLYHILGEVIKAGATTLNIPDTVGYTVPEEFGKLIADIKANTPGIENVIISTHCQNDLGLSTANTVAGSCAGARQLEVTINGIGERAGNASLEEVVMTLKCRGQSLGELYTGIWTEHIVKASKMVAEYSGLLVQPHKAIVGANAFKHESGIHQHGMLKHKGTYEIMSPEDIGLQRADESGLVLGKLSGRHALQKRLEQMGYSFEGKELDNIFWRFKSVAEKKKHVLDEDIEALVIDEVYQPDSVWSLGDLQVTCGTLGLSTATVKLIDAEGKEHVACSVGTGPVDSAYKAVDLIAKVPVTLLEYSLSAVTEGIDAIATTRVLIRGNDGVTSTHASGDKILRTFSGSGSEVDVVVSSVRAYVSALNKMLGYKKKPSQKGSAGNSHVTASVDEPAATSV*

Click here to download the sequence:
Link to NCBI Protein BLAST