Transcript Information: S_Transcript_374977.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.14326486725659
Replicate 30.23951605303377
Condition 2: 8 Hour
Replicate 10.13847656050086
Replicate 20.29054348882762
Replicate 30
Condition 3: 24 Hour
Replicate 10.28369978559213
Replicate 20.14716760763862
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_374977.p2 GENE.S_Transcript_374977~~S_Transcript_374977.p2 ORF type:complete len:154 (+),score=23.99,RVT_1|PF00078.23|6.3e-20 S_Transcript_374977:2888-3349(+)
ATGAGTTGTGTAACTACTGTTAGTTACAGTTTTCTGGTGAATGGATGTCTTTCTAAACCTATGGAGGCCAAAAAGGGGTTGAGACAGGGAGATCCCCTTTCTCCTTATCTCTTTGTGATTTGTATGAAGTATTTAAACAGATGCCTCAAGGAGCTTGGAGAAATACCTGGTTTCAGCTATCATCCAAGGTGCTCAAAACTGGCTATTACTCATCTGTGTTTTGCAGATGATCTGATGTTATTTTGTAGAGGAGATATTGGTTCTGTCCAGCTGCTCCATGAAGCATTTTGTAAATTCACAATAGCATCTGGTCTGAAAGCTAATCTCAACAAGAGCTCTATCTATTTTGGGGGTGTCAAGGTTGAGATCAAGGAGCAAATTCTTGCTTATTTGGGATATACTGAGGGCAAGCTACCCTTTAGATATCTCGGGGTTCCCTTTCTACAAAAAAAATCACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_374977.p2 GENE.S_Transcript_374977~~S_Transcript_374977.p2 ORF type:complete len:154 (+),score=23.99,RVT_1|PF00078.23|6.3e-20 S_Transcript_374977:2888-3349(+)
MSCVTTVSYSFLVNGCLSKPMEAKKGLRQGDPLSPYLFVICMKYLNRCLKELGEIPGFSYHPRCSKLAITHLCFADDLMLFCRGDIGSVQLLHEAFCKFTIASGLKANLNKSSIYFGGVKVEIKEQILAYLGYTEGKLPFRYLGVPFLQKKSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST