Transcript Information: S_Transcript_374977.p5


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92836050820397
Replicate 21.0261762584891
Replicate 31.5011529370373
Condition 2: 8 Hour
Replicate 11.2398482742519
Replicate 23.9020666232081
Replicate 32.4785869308118
Condition 3: 24 Hour
Replicate 11.2700513657322
Replicate 21.8447288492376
Replicate 30.879838758318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_374977.p5 GENE.S_Transcript_374977~~S_Transcript_374977.p5 ORF type:complete len:86 (+),score=12.58,zf-RVT|PF13966.2|6.2e-08 S_Transcript_374977:3780-4037(+)
ATGGTGAGGAAGATCATATGCTATGACAATCAAGTGATTTCAAACTTGCAGGATGAAGTAAAAGTTAAGATTGGGACTTTATACAAGGATATCTTACCTGAGTATGAAAAACCTACTTGGAGAAGGATTATCTTATCTAATAAAGCTAGACCAAGGGCCATTTTTGTGACTTGGCTTGCTCTTTGGAATAGACTACCCACAGTGGAGAGAATGTTAAAATGGGGATTTCAGGGGCCTAAAGAGTGTGCATTCTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_374977.p5 GENE.S_Transcript_374977~~S_Transcript_374977.p5 ORF type:complete len:86 (+),score=12.58,zf-RVT|PF13966.2|6.2e-08 S_Transcript_374977:3780-4037(+)
MVRKIICYDNQVISNLQDEVKVKIGTLYKDILPEYEKPTWRRIILSNKARPRAIFVTWLALWNRLPTVERMLKWGFQGPKECAFC*

Click here to download the sequence:
Link to NCBI Protein BLAST