Transcript Information: S_Transcript_374978.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45983587447396
Replicate 20.66712538618835
Replicate 30.51783060277928
Condition 2: 8 Hour
Replicate 10.59876905858041
Replicate 20.53151260267169
Replicate 30.55246257291528
Condition 3: 24 Hour
Replicate 10.094362347691552
Replicate 20.44054925310394
Replicate 30.32685154736652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_374978.p1 GENE.S_Transcript_374978~~S_Transcript_374978.p1 ORF type:complete len:463 (+),score=58.55,RVT_1|PF00078.23|2.2e-41 S_Transcript_374978:2497-3885(+)
ATGGAAATTCTGGGGTTCTATGGCAAACTTATGGGGACAGCTGCTACTGAACTTCCTATGATAGACAGATTGACAATAAGGAAGGGTCCTGCACTCAACTTAGATCAAATTCAGAAGCTTTTCATACCAGTGACAGAAGGTGAAATTTGGGATGCTCTAAAAGGCGTAGGGGATGATAACGCTCCAGGACTGGATCGTTTTGGTGCATACTTCTTCAAACAGACCTGGGGTACTATTAGACAGGATATAATGAAAGCAGTGATGTGCTTTTTTTCTACTGGTAAGTTGTTTAAACCAGTTAATTCTGCAGTAGTGACCTTAATTCCTAAGATTAAAAATCCTTCTTTTGTTAAGGATTTTAGCCCTATTGCATGCTGCACCACCCTTTATAAAATCATTTCAAAAGTTATTATGGGGAGAATGCAAGGAGTATTGGAGGACGTTATTGGAGTTGGGCAGTCAGCTTTTATCAAGGGGAGAATGATTACTGATAATATTATCTTGTGCTATGAATTAGTAAAATGCTATAACAGGAAAAATATCTCACCTAGATGCACTATTACGGTGGATTTACAAAAGGCTAATGATTCAGTTGAATGGCCATTTTTGAAGTTTGCATTGATTGAACTGGGTTTCCCTGAACAATTTATCCTTTGGATTATGAGTTGTGTAACTACTGTTAGTTACAGTTTTCTGGTGAATGGATGTCTTTCTAAACCTATGGAGGCCAAAAAGGGTTTGAGACTGGGAGATCCCCTTTCTCCCTATCTCTTTGTGATTTGTATGGAGTATTTAAACAGATGCCTCAAGGAACTTGGAGAAATACCTGATTTAAACTATCATCCAAGGTGCTTAAAACTGGGTATTACTCATCTGTGTTTTGCAGATGATCTGATGTTATTTTGTAGAGGAGATATTGGTTCTGTCCAGCTGCTCCATGAAGCATTTTGTAAATTCACAATAGCATCTGGTCTGAAAGCTAATCTCAACAAGAGCTCTATCTATTTTGGGGGTGTCAAGGTTGAGATCAAGGAGCAAATTCTTGCTTATTTGGGATATACTGAGGGCAAGCTACCCTTTAGATATCTCGGGGTTCCCCTTTCTACAAAAAAACTCACAGTGACTGAATGCCTTCCTTCGGTGGAGAAAATTGTGGAGAGAATTGGATCATGGACAGCAAGGCTAATCTCTTATGCTGGCAGAAAGCAGCTTATTCAGGCTGTTATTTTTGGTATTCAATCATATTGGACTCAAATTTTTATCCTGCCTAAAAAGATCATTAACATGGTTGATGCAGTGTGTAGGAACTATTTGTGGACTGGGAAGACAAGAATGACTAAACGGAACCTTATTGCATGGGAAAGAGTTCGCACTCCAGTTACTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_374978.p1 GENE.S_Transcript_374978~~S_Transcript_374978.p1 ORF type:complete len:463 (+),score=58.55,RVT_1|PF00078.23|2.2e-41 S_Transcript_374978:2497-3885(+)
MEILGFYGKLMGTAATELPMIDRLTIRKGPALNLDQIQKLFIPVTEGEIWDALKGVGDDNAPGLDRFGAYFFKQTWGTIRQDIMKAVMCFFSTGKLFKPVNSAVVTLIPKIKNPSFVKDFSPIACCTTLYKIISKVIMGRMQGVLEDVIGVGQSAFIKGRMITDNIILCYELVKCYNRKNISPRCTITVDLQKANDSVEWPFLKFALIELGFPEQFILWIMSCVTTVSYSFLVNGCLSKPMEAKKGLRLGDPLSPYLFVICMEYLNRCLKELGEIPDLNYHPRCLKLGITHLCFADDLMLFCRGDIGSVQLLHEAFCKFTIASGLKANLNKSSIYFGGVKVEIKEQILAYLGYTEGKLPFRYLGVPLSTKKLTVTECLPSVEKIVERIGSWTARLISYAGRKQLIQAVIFGIQSYWTQIFILPKKIINMVDAVCRNYLWTGKTRMTKRNLIAWERVRTPVTA*

Click here to download the sequence:
Link to NCBI Protein BLAST