Transcript Information: S_Transcript_375064.p1


Annotated TAIR IDAT5G58990.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23815028-23815819 | Forward length=148
E-Value1.3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.242867960802
Replicate 214.082631632456
Replicate 312.654856142471
Condition 2: 8 Hour
Replicate 115.880609810631
Replicate 215.231896946197
Replicate 320.5221724282
Condition 3: 24 Hour
Replicate 112.316796010654
Replicate 211.090801409702
Replicate 315.294218415868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_375064.p1 GENE.S_Transcript_375064~~S_Transcript_375064.p1 ORF type:5prime_partial len:188 (+),score=32.48,MRP-S34|PF16053.1|4.2e-17 S_Transcript_375064:2-565(+)
GGCGCTGAGCCGGTTCGGGCTAGGCCGCTACAGCCTGCTAGTAGTAAGGAAAGTGGAGGAAAACCTTCATTTTGGGCAGTTCTAACAAAAGGAAGTAAGCGAGTAAGCTGCTACAGAAAATCAATGGCCTTGACAAGCAGACTGATTTCTGAGAGAGGAGCAATATCTCTACTCAGGAGGATTCCTTTTGATCTCTTTCAAACAATCAGTTTCAGTACATCTCCTGCTTCTACCACCACATCCAAAAACCCTACAAGCGAGGCATCCAACAAGCCCAAACGAAGGAAGAAGAAGAACCTCTTCGAAGTAGTCCAGTTCTTGCCCAACTGGGGCATTGGCTATCACATGGCTAAAACCCATTGGACCAATGTTTCCTATGAGATCACCAAGATTAATCTCTACAAGGATGGTAGGCATGGAAAAGCTTGGGGGGTTGCCTACAAAGATGGTGTACCTGCTCCTGAGCCGAAGAAAATTAGTGGAGTTCACAAGCGCTGTTGGAGATACATCCCAAGCCCCATGAAATTGGAAGCAGAGTCAAAACTTGAGGCGCAGGATCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_375064.p1 GENE.S_Transcript_375064~~S_Transcript_375064.p1 ORF type:5prime_partial len:188 (+),score=32.48,MRP-S34|PF16053.1|4.2e-17 S_Transcript_375064:2-565(+)
GAEPVRARPLQPASSKESGGKPSFWAVLTKGSKRVSCYRKSMALTSRLISERGAISLLRRIPFDLFQTISFSTSPASTTTSKNPTSEASNKPKRRKKKNLFEVVQFLPNWGIGYHMAKTHWTNVSYEITKINLYKDGRHGKAWGVAYKDGVPAPEPKKISGVHKRCWRYIPSPMKLEAESKLEAQDL*

Click here to download the sequence:
Link to NCBI Protein BLAST