Transcript Information: S_Transcript_375096.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value9.4E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9304767735364
Replicate 22.1719844642113
Replicate 32.7711883234426
Condition 2: 8 Hour
Replicate 14.0882872628701
Replicate 24.2889036252326
Replicate 33.2028993810594
Condition 3: 24 Hour
Replicate 12.4900903460781
Replicate 22.9357268881279
Replicate 32.2216308543367


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_375096.p1 GENE.S_Transcript_375096~~S_Transcript_375096.p1 ORF type:internal len:193 (-),score=59.95 S_Transcript_375096:3-578(-)
AGATACTCAAATGGGGCTGGTGGTGGTGCTGGGCATGGAGGCAAGGGAGGTTCAGGGTTGTTTAATGGAACAGTAAGTGAAGGTGGGGGTAAATATGGCAATGCCCATCTTCCTTGTGAACTGGGTAGTGGATCTGAGGGCCCAAATGAATCATATGGACATGTGGCTGGTGGTGGAATGATAGTGATAGGTACAATGCAGTGGCCCCTATGGAGGTTGGATTTACATGGATCTTTGAGGGCCGATGGTCAAAGATATGGTAAAGTGGCAAAAAATACCAGTGGCACTTTGATTGGAGGTCTTGGTGGGGGCTCTGGTGGGACTGTTCTTGTTTTTCTGCAAAAGCTCATACTTGCGGAGGATTCCAACTTATCTGTTGTTGGTGGAAGAGGTGGTCCTCTGGGGGGTGGTGGTGGTGGTGGTGGACGAATTCATTTTCATTGGTCTGATATAAATACTGGAGATGAATATGTTCCAATTGCCACAGTAAAGGGTAACATTGATAGTAGAGGAGGTGCAGGAGATAGTCCAGGTCATTATGGAGAAGAGGGCACAATCACCGGGAGAGAGTGTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_375096.p1 GENE.S_Transcript_375096~~S_Transcript_375096.p1 ORF type:internal len:193 (-),score=59.95 S_Transcript_375096:3-578(-)
RYSNGAGGGAGHGGKGGSGLFNGTVSEGGGKYGNAHLPCELGSGSEGPNESYGHVAGGGMIVIGTMQWPLWRLDLHGSLRADGQRYGKVAKNTSGTLIGGLGGGSGGTVLVFLQKLILAEDSNLSVVGGRGGPLGGGGGGGGRIHFHWSDINTGDEYVPIATVKGNIDSRGGAGDSPGHYGEEGTITGRECP

Click here to download the sequence:
Link to NCBI Protein BLAST