Transcript Information: S_Transcript_375616.p1


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeHomolog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7623265368218
Replicate 21.1611994503955
Replicate 31.7472065763411
Condition 2: 8 Hour
Replicate 12.4692557209312
Replicate 24.7098628715214
Replicate 35.8338109234686
Condition 3: 24 Hour
Replicate 13.4491921300938
Replicate 24.5327623152695
Replicate 32.3894568383794


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_375616.p1 GENE.S_Transcript_375616~~S_Transcript_375616.p1 ORF type:complete len:95 (-),score=9.43 S_Transcript_375616:151-435(-)
ATGCAGGGCTGGTATCATAATGTAGTTTTTCTGGGCGAGGAGCAAGACATTCCCATCTTAACCATGACGTGTGACCTTTCCAATGTGGAGGGCTTCAGATCTGGACAACTACCATTGCGTGCTCCCGCCAAGGAATACGCGAATACCTTGATTAGGGGGCTTTCAGAAGGGGAACAGCTTTCTGAAGCTGAAGCAATGACCTACATTGAGGAAGCCGCGAAAACCCCTCTTTTAACTGTTTGTTTAAAGACTTTTTTTGGGGCAATCCATGACCAGGGGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_375616.p1 GENE.S_Transcript_375616~~S_Transcript_375616.p1 ORF type:complete len:95 (-),score=9.43 S_Transcript_375616:151-435(-)
MQGWYHNVVFLGEEQDIPILTMTCDLSNVEGFRSGQLPLRAPAKEYANTLIRGLSEGEQLSEAEAMTYIEEAAKTPLLTVCLKTFFGAIHDQGV*

Click here to download the sequence:
Link to NCBI Protein BLAST