Transcript Information: S_Transcript_375742.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22062789557515
Replicate 30
Condition 2: 8 Hour
Replicate 10.21325390317133
Replicate 20
Replicate 30.21315847604981
Condition 3: 24 Hour
Replicate 10.21844883490594
Replicate 20.45327623152695
Replicate 30.25222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_375742.p2 GENE.S_Transcript_375742~~S_Transcript_375742.p2 ORF type:5prime_partial len:100 (+),score=11.37,RVT_1|PF00078.23|9e-09 S_Transcript_375742:2-301(+)
CAAATCTTGGATACCACTTTGGTGGCGAATGAGGTGGTGGATGATGCTAGGAGGCCGGGTCTTGAGGAGGCGGTGTTTGAACTGGATTTTGAGAAGGCCTACGATAGAGTTAATTGGTCTTTCCTTGATCGAGTTCTCAAACAGAAGGGTTTCAGAGAGCGTTGGAGGAGGTGGATTAGAGGGTGCTATTCTAATGCGTTCTTTGCTGATGAACGGGGCTCCAAGGGACTGGTTTACTTCCTCTCGAGGTCTTCGACAAGGGGACCCCTTGTCTTCGTCCTTATTTACGCTTGCGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_375742.p2 GENE.S_Transcript_375742~~S_Transcript_375742.p2 ORF type:5prime_partial len:100 (+),score=11.37,RVT_1|PF00078.23|9e-09 S_Transcript_375742:2-301(+)
QILDTTLVANEVVDDARRPGLEEAVFELDFEKAYDRVNWSFLDRVLKQKGFRERWRRWIRGCYSNAFFADERGSKGLVYFLSRSSTRGPLVFVLIYACG*

Click here to download the sequence:
Link to NCBI Protein BLAST