Transcript Information: S_Transcript_375793.p1


Annotated TAIR IDAT1G42190.1
Annotated Gene NameGAG/POL/ENV polyprotein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:15761082-15761276 | Forward length=64
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12464852857353
Replicate 30
Condition 2: 8 Hour
Replicate 10.24096486234049
Replicate 20.1263946250832
Replicate 30
Condition 3: 24 Hour
Replicate 10.12341742085082
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_375793.p1 GENE.S_Transcript_375793~~S_Transcript_375793.p1 ORF type:complete len:177 (-),score=15.59 S_Transcript_375793:195-725(-)
ATGATTGAGGAAACCATAGAAACTGTAAAATTTATTCAACAGAAAATGAAGACCTCCCAAGATCGGCAAAAGAAATATTTTGACCTACAGAGGAAGAAAATAGAGTTTCAAGAAGGTGACCGAGTATTTTTGAAGGTGTCACCGATGCCTGGTGTGAAAAGATTCGAAAAGAAAGGAAAATTAAGCCCAAGATACATTGGGCCATACAGAATTATTAAACGAGTTGGACAGGTAGCTTACAAGTTAGAATTACCTGCAGAACTCTCACGAGTCCATAGTACATTTCATGTGTCTCAACTTAGAAAATATATACCTGATCCGTCACATGTGCTGGAAAAAGAACCTGAAAAGCTAAGGGAAAATTTAACCTATACTGAATTTCCAATAGCCATAGTAGATCAAAGGATTAAACAGCTAAGAAACGAAGCTATACCCTTGGTAAAAGTATTATGGAGCAACCATGGCCAGGAGGAAGCTACCTCGGAAACAGAATTGGAAATGCGACAGAAATACCCTCACTTGTTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_375793.p1 GENE.S_Transcript_375793~~S_Transcript_375793.p1 ORF type:complete len:177 (-),score=15.59 S_Transcript_375793:195-725(-)
MIEETIETVKFIQQKMKTSQDRQKKYFDLQRKKIEFQEGDRVFLKVSPMPGVKRFEKKGKLSPRYIGPYRIIKRVGQVAYKLELPAELSRVHSTFHVSQLRKYIPDPSHVLEKEPEKLRENLTYTEFPIAIVDQRIKQLRNEAIPLVKVLWSNHGQEEATSETELEMRQKYPHLFV*

Click here to download the sequence:
Link to NCBI Protein BLAST