Transcript Information: S_Transcript_376196.p1


Annotated TAIR IDAT5G55400.1
Annotated Gene NameActin binding Calponin Homology (CH) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22455535-22458950 | Reverse length=714
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2346794930304
Replicate 21.3473459271765
Replicate 30.70392122456491
Condition 2: 8 Hour
Replicate 10.65115695624834
Replicate 21.0246648231936
Replicate 31.4644475453804
Condition 3: 24 Hour
Replicate 11.1672838506424
Replicate 20.86503097619646
Replicate 31.1552081406923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_376196.p1 GENE.S_Transcript_376196~~S_Transcript_376196.p1 ORF type:complete len:131 (+),score=18.54 S_Transcript_376196:3-395(+)
ATGGACCAAGAGGTCGGATTGGAGGCCTTTCTCAAGGTTCATATGAGTTTACAAGCTCGGGCAGCAGCGCATTCAAGTGGAGCGAAGAACTCGTCTGTCTTTCTAAGGCGTCCACAACTACCCCTTCATACAATTAGCCAATCAGAGAAGGGATGCTATGTTCATCACACCAACACTTATCTTGGCCATGACCCTTTTCTGAAGCAGTTTCTTCCTGTCCATCTGAATGGTGATGATATCTTTGATCTCGCTAAAGATGGAGATGGAGTTTCTTCCTGTCCATCCGATTACCATTTTTATGGTGTTACATTATGTGAACAAATAATTCTTGTGACTCGTTACCATTTCTCAGCTGTTAAGCATGGAAGTCGAGGCAACACATTTGGATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_376196.p1 GENE.S_Transcript_376196~~S_Transcript_376196.p1 ORF type:complete len:131 (+),score=18.54 S_Transcript_376196:3-395(+)
MDQEVGLEAFLKVHMSLQARAAAHSSGAKNSSVFLRRPQLPLHTISQSEKGCYVHHTNTYLGHDPFLKQFLPVHLNGDDIFDLAKDGDGVSSCPSDYHFYGVTLCEQIILVTRYHFSAVKHGSRGNTFGF*

Click here to download the sequence:
Link to NCBI Protein BLAST