Transcript Information: S_Transcript_376543.p2


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.51708605841871
Condition 2: 8 Hour
Replicate 10.19930271324423
Replicate 20.41816539513508
Replicate 30.19921352901852
Condition 3: 24 Hour
Replicate 10.20415778963172
Replicate 20.21181132314343
Replicate 30.23572004116931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_376543.p2 GENE.S_Transcript_376543~~S_Transcript_376543.p2 ORF type:complete len:107 (+),score=6.50 S_Transcript_376543:1009-1329(+)
ATGATGGGGACCTCTCAGTCCACTCTTTTGTCCTCTCCTAGGCCGCCCGTTACACGTACCATGACCACGCGTGCTATGCGAGGCATCTTCAAGCCCAAAACACCTTTTAATCTTACCGCCTCTATCTCCCCATCTCCCCTTCCCCTTAACCCAAAAGTCGCTTTGTCCGACCCGAATTGGAAATTAGCCATGCATGATGAGTACAAAGCTCTTACTGAAAACAACACATGGGAGTTGGTGCCTCAACCTCTTAATACTAATATCATTCGTTCTTTGTGGATTTTTCGACATAAATGGAATTCTGATGGTTCGTTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_376543.p2 GENE.S_Transcript_376543~~S_Transcript_376543.p2 ORF type:complete len:107 (+),score=6.50 S_Transcript_376543:1009-1329(+)
MMGTSQSTLLSSPRPPVTRTMTTRAMRGIFKPKTPFNLTASISPSPLPLNPKVALSDPNWKLAMHDEYKALTENNTWELVPQPLNTNIIRSLWIFRHKWNSDGSFE*

Click here to download the sequence:
Link to NCBI Protein BLAST