Transcript Information: S_Transcript_37657.p1


Annotated TAIR IDAT3G14172.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4698860-4704773 | Reverse length=1270
E-Value8.4E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.044699087129
Replicate 212.757502069886
Replicate 312.94664332469
Condition 2: 8 Hour
Replicate 110.571690647967
Replicate 29.4197257430428
Replicate 311.931416831522
Condition 3: 24 Hour
Replicate 110.176670473925
Replicate 210.18743166163
Replicate 310.404541788739


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37657.p1 GENE.S_Transcript_37657~~S_Transcript_37657.p1 ORF type:complete len:1406 (+),score=422.83 S_Transcript_37657:750-4967(+)
ATGACGTCGGATGTGCCTCTTGATTATGCTGTTTTTCAGTTGTCTCCAAAACGTTCACGTTGTGAGTTGTTCGTTTCTTATGATGGCAGTACCGAGAAGCTTGCATCAGGGCTTGTAAAACCTTTTGTTACTCACCTCAAGGTTGCAGAAGAACAAGTAGCATTGGCTGTGAAGTCCATCAAACTTGAGGTGGAGAGATATAAAAATGCAGAAGCATGGTTCACAAAGGGAACTCTTGAGAGGTTTGTGCGGTTTGTTAGCACACCTGAGGTTTTGGAATCGGTCAACACGTTTGACACAGAGATGTCCCAGTTGGAAGCAGCCCGCAAAATCTATTCACAGGGTTCGGGAGACCATCAATCCAGTGCATCAAAAGGAGATGGAACCGGAGCCGCCGCAGCATCTGATGCTACAAAGAAGGAGCTCTTACGAGCCATTGATGTAAGGCTTGCAGCAGTTAAACAGGACTTGAGTACAGCTTGCACCCGTGCGTTTTCTGCTGGTTTCTATCCTGTAACTGTCTCTGAACTTCAGCACTTTGCAGATCGCTTTGGTGCTCACCGCCTGAGTGAAGCATGCAGCAAGTTCATTGAGCTCTCACAGAGACGCCCTGATCTGTTCAGCAAGAACAATCCAGCATGGAAATCCTCGTCTGGCAATGCCCTTCGCTCTTCTACTGGCTCCGACATGTCCCTGGACTCCCCATCCGACCAGCCCAAATCCTCCACATGCAAGGCCACGTTCCCTTTGCAGCATTTCTCTAGGGAGCCGAGCCCCAGCCCTGTGGATGAACAGGAGGAGAGAGAAAATCAAAAAGACCGAGACAATGACAAAGAGAAAGACAACCCTTCCACTTCTTCAACCACTACTACAACGACCGAGTCAGACCCCTCAACTCAGTCTTCTCAAAAGCCTCAACTCACAAGGCGGCTTAGTGTGCAAGAACGAATCAGCCTCTTTGAGAGCAAGCAGAAGGAAAATTCCCCCTCTGCTGCTACTCCTTCCTCTGCTTCAGTTGGAGGAAAACCCGAGCTCCGGCGTCTCTCCTCTCTTTCCTCTGATATTGCCTCATCCTCCGACAGGGCTGTGTTGAGGAGATGGAGTGGGGCCAGTGACATGAGCATTGATGTGAGTGGAGAGAGAAAGGAACCTGATAGCAATGCCAATACTCCAACACCCACTTCTGCTACTTCAAAATTTCCTGTTCTCCCTCCAAAATCTAAGGATCAGGTTGATTTGAAGGGGGACGAGGGGGATTCTGAGAAGGATTCTAAGTTGCCTGTGAAGGCTAAATTTGGTGCAAACTTGAAAATTGCCTCATCTGGTGATGGTTCTGGGTCTGCATCAGAGGAGCCTGCCTCATCTGATGCAAACTTGAAAGTTGCATCCTCTTCAGGCAGATCGGAGAATGTGGGGTTGAAAAGTCAACCTCCTAGTGGTAGTAGGATTCGGCCAAGAGCAGCATCTTTTGGAAGGGTTGAGGATTTTGGGTTGGAAAATCAATCTACTCCTATCCAGACGCAGTTTAATTCCTCTGACCAAACCTTCTCTGAGGAGAAGGTGAAGGGCCCTTCTGGTGGTGGAGCGCAGGACACTGGCAACAATTTTGAAGCATCAGATAGTCATCAGACTCATCACGCTGAGGTTGAGGAAGTCAGGGTAAGGGACCAGCCAAGTTTTAGATCATTATTCAGGTCATCTCAGAGGAGAACGGTAGAAGTTTCACAAGATTCAGCAGCCTCTGAAGTCCATTTGCAATCTGTGATCCCTGACAAAGACAGTGAGGCTGATTCCACATTTGAGCCTAGGTGGAAGCCTTTAGTGGCAGATATCGAAAAGGGTGGAAGGAAGGATTTTGAGACATTTGACAAGCAAGCTGAAAGTCCCTCAATTCAAATGGAGAGTTCTGGTTCATCGAGGTCTAAATTACAGGGTCATTTTTCTGAACAAATGAAGAGGCCTGGAGGAAGAAGGGAAGAGGGCGGTTCTGGTTCTGGGAGCAGCCAGTCAGGCATCACTAGGAAAAATGCACCTGAGAGTCAAGAAGCTGTTTCTTCGATATCCTTGGCTCCTGTTGATCAAGCTCAGAGGGTGAGACAGCCGAAAGCAAACCAAGGGCTGAATGACGAGTTGAAAATGAAGGCGAACGAGCTTGAGAAGCTCTTTGCGGAACACAAACTTCGTGTTCCTGCAGATCAATCAAATTCTGCTCGAAGAACAAGGCCTGCTCAGATGCCAAAGGACCACGAAGGGAGTTCTGCTAATAGGAAGCAGGTGGTGGAAGCTTCTCCTGCACAGTTTGCTAACCTGACAATCGAGGCCGAGGTTACTCCTGGTTCCCGTAATATGGAGAATCTTGTTTCTACTCCCTTGATGAAAACTGTAGTTATTCAGGATTACGAAGTCACATCAAAGAACAATATCTATGGCCTTAGTTTTTCAGATGATTCTAGAGGACAATTTTATCAGAAATATATGCAGAAGAGAGATGCCAAATTAAGGGAAGATTGGAGTTTGAGAAGGGCTGACAAGGAAGCTAAGATGAAAGCCTTGCAGGATAGCCTTGAGAAAAGTAGAGCTGAGATGAAGGTCAAGTTGTCAGGGTCTGCAGACAAGAGGAATTCTGTTCAGGATTCTCGTCGACGAGCAGAAAAATTAAGGTCATTCAATGCCCGATCAGCAATGAAGAGAGAGCAGCCAATAGACTCGTTCATGAGTGATGAGGATGAAGATCAAGCTGAATTCCTTGGGAAAAAGCTAAGTGAGACATTTTTGGGGGATGGATCTTCTCGAAGTGCACAAAGTAAAAGGGCTTTACCAAACAAAAATGCAGCATCTTCCACACCTCGTAACTCAACAGCAGCAATTCCTCGGTCTACTGGGAAAGCTTCTAACTCTGCTGCGGGAAGGCGAAGATTGAATTCTGATAATCCTCTTGCGCAGTCAGTTCCTAATTTCTCTGACTTACGCAAGGAAAACACAAAACCTACATCCATAGGAGGTAAATCAAGCCGTCCACAAGGACGAAACCATGCTCGCAAAAAGAGCAGTTGTGAAGACATGCCACAGGTCAATGAAGAAAGATCACGACGGCCTCAGTCCTTGAGAAAGAGCACAGCTAATTCTATGGAGTTGAATGATTCCCATAACTCTGATGATGTGGATGATTCTGTCTTCATCTCGTCCAAGTTTGATAAAGTGGAGCATGAGGACTATGATAAATTCTCAAAGGATATAGAGTCAAAAGGTTTCGCAAGAAAGGGTAATGGTCTTGGGCGTATCACTGTTTCTGGCATTAGTGGATCAAAAGCTCCAGTGATGGTAGAGGCTGTGAGAAATGGGCATGATCTTGATGATTTGAGCTTTGAGACAGAAGAGATGACAGATGTGACCAAAGAAGAGGAGGATGATTTTGAGACCACATTACAAGGAGAATCTGCTGAGATGAACAGTGGCAAAGGGAGACTGAGCCAAGAATCTGACAAATCAGCAAATTCTGGGTATGAAAACAGTGATGCCTTTAGTTTTTCCCAAGCACGGCCTGCTTCCGCCACTGAACTGCCTACTTCCATGCCTTCTCTTTTTCGCTCAGTGGGATCAATACAAGATTCACCAGGGGAAAGCCCTGGATCGTGGAATTCTCGTGTGCTCAATCCATTTTCCTTTTCACATGAAATTTCAGACATTGATGCATCTGACTCGCCACTTGGGAGCCCTGCATCTTGGAACTTCCATTCTCTTGGGCAGTCTGATGCTGATGCTGCTAGAATGAGAAAGAAATGGGGAGCTGCTCAGAAACCCATTGTTGGCACTGACTCTTCACATAGCCGCAAGGATGTAACTAAAGGATTTAAGCGGTTCCTGAAGTTTGGGAGGAAGAATCGTGCTTCTGAAAGTCTAGCAGACTGGATTTCTGCAACTACGTCCGAAGGAGATGATGACACTGAAGATGGAAGAGATCCTATTAATCGGTCATCATCAGAAGATTTGAGGAAATCAAGAATGGGATTCTCACACAGCCATCAGTCTGATGATGCGTTTAATGAAAGTGAACTGTATAATGAACAAGTTCATGCCTTACAAAGCTCAATTCCAACACCACCAGCAAATTTCAAATTGAGGGAAGAACATTTGTCTGGAAGTTCTATGAAAGCGCCAAAGTCATTCTTTTCACTCTCAAATTTCCGGAGCAAGGGGAGCGACTCAAAGCCCAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37657.p1 GENE.S_Transcript_37657~~S_Transcript_37657.p1 ORF type:complete len:1406 (+),score=422.83 S_Transcript_37657:750-4967(+)
MTSDVPLDYAVFQLSPKRSRCELFVSYDGSTEKLASGLVKPFVTHLKVAEEQVALAVKSIKLEVERYKNAEAWFTKGTLERFVRFVSTPEVLESVNTFDTEMSQLEAARKIYSQGSGDHQSSASKGDGTGAAAASDATKKELLRAIDVRLAAVKQDLSTACTRAFSAGFYPVTVSELQHFADRFGAHRLSEACSKFIELSQRRPDLFSKNNPAWKSSSGNALRSSTGSDMSLDSPSDQPKSSTCKATFPLQHFSREPSPSPVDEQEERENQKDRDNDKEKDNPSTSSTTTTTTESDPSTQSSQKPQLTRRLSVQERISLFESKQKENSPSAATPSSASVGGKPELRRLSSLSSDIASSSDRAVLRRWSGASDMSIDVSGERKEPDSNANTPTPTSATSKFPVLPPKSKDQVDLKGDEGDSEKDSKLPVKAKFGANLKIASSGDGSGSASEEPASSDANLKVASSSGRSENVGLKSQPPSGSRIRPRAASFGRVEDFGLENQSTPIQTQFNSSDQTFSEEKVKGPSGGGAQDTGNNFEASDSHQTHHAEVEEVRVRDQPSFRSLFRSSQRRTVEVSQDSAASEVHLQSVIPDKDSEADSTFEPRWKPLVADIEKGGRKDFETFDKQAESPSIQMESSGSSRSKLQGHFSEQMKRPGGRREEGGSGSGSSQSGITRKNAPESQEAVSSISLAPVDQAQRVRQPKANQGLNDELKMKANELEKLFAEHKLRVPADQSNSARRTRPAQMPKDHEGSSANRKQVVEASPAQFANLTIEAEVTPGSRNMENLVSTPLMKTVVIQDYEVTSKNNIYGLSFSDDSRGQFYQKYMQKRDAKLREDWSLRRADKEAKMKALQDSLEKSRAEMKVKLSGSADKRNSVQDSRRRAEKLRSFNARSAMKREQPIDSFMSDEDEDQAEFLGKKLSETFLGDGSSRSAQSKRALPNKNAASSTPRNSTAAIPRSTGKASNSAAGRRRLNSDNPLAQSVPNFSDLRKENTKPTSIGGKSSRPQGRNHARKKSSCEDMPQVNEERSRRPQSLRKSTANSMELNDSHNSDDVDDSVFISSKFDKVEHEDYDKFSKDIESKGFARKGNGLGRITVSGISGSKAPVMVEAVRNGHDLDDLSFETEEMTDVTKEEEDDFETTLQGESAEMNSGKGRLSQESDKSANSGYENSDAFSFSQARPASATELPTSMPSLFRSVGSIQDSPGESPGSWNSRVLNPFSFSHEISDIDASDSPLGSPASWNFHSLGQSDADAARMRKKWGAAQKPIVGTDSSHSRKDVTKGFKRFLKFGRKNRASESLADWISATTSEGDDDTEDGRDPINRSSSEDLRKSRMGFSHSHQSDDAFNESELYNEQVHALQSSIPTPPANFKLREEHLSGSSMKAPKSFFSLSNFRSKGSDSKPR*

Click here to download the sequence:
Link to NCBI Protein BLAST