Transcript Information: S_Transcript_376727.p1


Annotated TAIR IDAT5G52580.2
Annotated Gene NameRabGAP/TBC domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21338052-21342848 | Forward length=690
E-Value5.5E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2456538935502
Replicate 24.5499137997988
Replicate 34.0186506641309
Condition 2: 8 Hour
Replicate 17.3850573471783
Replicate 25.9193996400833
Replicate 37.5476347550712
Condition 3: 24 Hour
Replicate 14.9299737060485
Replicate 24.4974879003647
Replicate 35.7902747856103


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_376727.p1 GENE.S_Transcript_376727~~S_Transcript_376727.p1 ORF type:5prime_partial len:257 (-),score=14.60,RabGAP-TBC|PF00566.14|3.7e-41 S_Transcript_376727:65-835(-)
CGGATTGTTGATTGGAAAGCTTTAAGAAAGAGAATATTATATGGTGGTGTTGCCCATGAACTGCGAAAAGAGGTTTGGCCATTCTTGTTGGGATACTATGATCACAATTCGACATATGCGGAACGTGAATACCTTCGATCAGTGAGGAAACAAGATTATGAAATTATAAAGCTCCAATGGCAGAGCATATCTCCAGAGCAAGCAAAAAGATTTACAAAGTTTAGGGAGAGGAAGGGCCTAATCGAGAAGGATGTGGTAAGGACAGACAGATCATTTTCCTTCTTCGATGGAGACGATAATCCCAATATCAATCTCCTGTACGATATATTGCTGACTTATTCATTCTACAATTTTGACCTTGGTTATTGTCAGGGTATGAGTGATTATCTCTCGCCTTTATTGTTCGTCATGGAAGATGATTCTGAAGCATTTTGGTGTTTTGCTGCACTAATGGAACGAGTGGGGCCAAATTTTAATCGTGATCAGAGTGGCATGCATGCACAACTTTTTGCTTTATCAAAGCTGGTGGAACTATCTGACGGTCCGCTGCATAACTATTTTAAGCAGAATGACTGCTTGAATTATTTCTTTTGTTTCCGGTGGATTCTTATACAATTCAAAAGGCAAGTCCCCTCACTGCACAAATGCATGTTGCTATTGCTACTCAGGTTATTGTGTAATGTTTGCGTATATCTCTCTGCCTTCTTCTTAGTAATGTTAGAATTAGTTTGGGAGTGCAAAGTTGACATTAAATGCTCGAAGTTTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_376727.p1 GENE.S_Transcript_376727~~S_Transcript_376727.p1 ORF type:5prime_partial len:257 (-),score=14.60,RabGAP-TBC|PF00566.14|3.7e-41 S_Transcript_376727:65-835(-)
RIVDWKALRKRILYGGVAHELRKEVWPFLLGYYDHNSTYAEREYLRSVRKQDYEIIKLQWQSISPEQAKRFTKFRERKGLIEKDVVRTDRSFSFFDGDDNPNINLLYDILLTYSFYNFDLGYCQGMSDYLSPLLFVMEDDSEAFWCFAALMERVGPNFNRDQSGMHAQLFALSKLVELSDGPLHNYFKQNDCLNYFFCFRWILIQFKRQVPSLHKCMLLLLLRLLCNVCVYLSAFFLVMLELVWECKVDIKCSKFY*

Click here to download the sequence:
Link to NCBI Protein BLAST