Transcript Information: S_Transcript_377818.p1


Annotated TAIR IDAT5G58490.1
Annotated Gene NameNAD(P)-binding Rossmann-fold superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23643068-23644455 | Forward length=324
E-Value1E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.048501441044
Replicate 225.808016179932
Replicate 324.818002877932
Condition 2: 8 Hour
Replicate 130.210969615938
Replicate 231.762501155167
Replicate 329.473764589604
Condition 3: 24 Hour
Replicate 126.227344684695
Replicate 229.379015006376
Replicate 334.407850700806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_377818.p1 GENE.S_Transcript_377818~~S_Transcript_377818.p1 ORF type:complete len:324 (+),score=66.27,Epimerase|PF01370.17|3.2e-27,3Beta_HSD|PF01073.15|5e-25,GDP_Man_Dehyd|PF16363.1|4.1e-17,GDP_Man_Dehyd|PF16363.1|2.5e+03,NAD_binding_4|PF07993.8|0.018,NAD_binding_4|PF07993.8|1e-06,NmrA|PF05368.9|1.1e-10,Polysacc_synt_2|PF02719.11|3.3e-09,Polysacc_synt_2|PF02719.11|1.8e+03,NAD_binding_10|PF13460.2|3.6e-07,KR|PF08659.6|7e-07,adh_short|PF00106.21|9.4e-05,adh_short|PF00106.21|1.5e+02,adh_short|PF00106.21|3.9e+03 S_Transcript_377818:154-1125(+)
ATGTCGGGGAAGGAGGAAGTGGTGTGCGTGACTGGAGGCAGCGGCTTCATCGGTTCCTGGCTTGTCTCTCTCCTCCTCGCTCGTGGCTACACCGTTCACTCCACCGTTAAGGATCTCAATGATGAGAAGGAAACGAAACACTTGAAAGCCCTAGAAGGAGCTGACACTCGCCTTCGATTGTTCCAAATTGATCTTCTTGATTACGACTCCATTGTCGCCGCTGTTACTGGCGCTGTCGGAGTTTTCCATTTGGCTTCCCCTTGCATTGTCGATCAAGTTCATGACCCTCAGAGAGAGCTGTTGGACCCAGCAATTAAAGGAACAAACAACGTGCTGAGAGCAGCCAAGGAAGCTGGAGTGAAGCGCGTCGTGCTGACCTCATCAATATCAGCTATTACACCCAGTCCCAATTGGCCTGCTGATGTTGTTAAGGGTGAAGATTGTTGGGCTGATACTGACTACTGCAAGCAAAATGGGTTGTGGTATCCGCTCTCCAAGACATTGGCCGAAAAAGCAGCTTGGGAGTTCGCCAAAGAGAATGGTTTGGACTTGGTTGTGGTGAATCCTGGCACTGTTATGGGGCCTGTTCTTCCACCAACTCTGAATGCAAGCATGCTTATGCTTCTTCGCCTTCTTCAAGGTTGCCCTGAAACTTATCAGGACGTTTTCATGGGATCTGTACACGTCAAGGATGTAGCTCTGGCACACATTTTGGTATATGAAAACAAGTCTGCATCTGGGAGGCACTTGTGCGTGGAAGCTATATCACATTATGGTGACTTTGCTGCCAAGGTTGCAGAACTATGCCCGGAGTATAATGTGCCGAGGTTGCCAAGAGACACTCAACCTGGGCTGTTGAGGGCCAAGGATGCATCCAAAAAGCTGATGGACCTAGGTTTGCAATTCATACCAATGGAGCAAATCATCAAAGAATCTGTTGAGAGTTTGAAGAGCAAAAGATTTTTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_377818.p1 GENE.S_Transcript_377818~~S_Transcript_377818.p1 ORF type:complete len:324 (+),score=66.27,Epimerase|PF01370.17|3.2e-27,3Beta_HSD|PF01073.15|5e-25,GDP_Man_Dehyd|PF16363.1|4.1e-17,GDP_Man_Dehyd|PF16363.1|2.5e+03,NAD_binding_4|PF07993.8|0.018,NAD_binding_4|PF07993.8|1e-06,NmrA|PF05368.9|1.1e-10,Polysacc_synt_2|PF02719.11|3.3e-09,Polysacc_synt_2|PF02719.11|1.8e+03,NAD_binding_10|PF13460.2|3.6e-07,KR|PF08659.6|7e-07,adh_short|PF00106.21|9.4e-05,adh_short|PF00106.21|1.5e+02,adh_short|PF00106.21|3.9e+03 S_Transcript_377818:154-1125(+)
MSGKEEVVCVTGGSGFIGSWLVSLLLARGYTVHSTVKDLNDEKETKHLKALEGADTRLRLFQIDLLDYDSIVAAVTGAVGVFHLASPCIVDQVHDPQRELLDPAIKGTNNVLRAAKEAGVKRVVLTSSISAITPSPNWPADVVKGEDCWADTDYCKQNGLWYPLSKTLAEKAAWEFAKENGLDLVVVNPGTVMGPVLPPTLNASMLMLLRLLQGCPETYQDVFMGSVHVKDVALAHILVYENKSASGRHLCVEAISHYGDFAAKVAELCPEYNVPRLPRDTQPGLLRAKDASKKLMDLGLQFIPMEQIIKESVESLKSKRFLS*

Click here to download the sequence:
Link to NCBI Protein BLAST