Transcript Information: S_Transcript_37804.p1


Annotated TAIR IDAT3G59090.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 198 Blast hits to 197 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 190; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21839334-21842449 | Forward length=373
E-Value3.6E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4437850944482
Replicate 27.0625926912158
Replicate 37.8891024040331
Condition 2: 8 Hour
Replicate 112.928140305571
Replicate 210.710601756696
Replicate 312.439276506023
Condition 3: 24 Hour
Replicate 16.8071874899869
Replicate 26.9981741128098
Replicate 35.5731429563713


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37804.p1 GENE.S_Transcript_37804~~S_Transcript_37804.p1 ORF type:complete len:353 (+),score=59.23,DUF1084|PF06454.7|2.3e-13,DUF1084|PF06454.7|4.7e-10 S_Transcript_37804:660-1718(+)
ATGTGGGAATTGAGGGGTGGTACTTGCTTCCCTCCTGAGATTATTGCTGTTGATGCTGCCCTTGCCTGTATTGATGCTGCTATTGCTGTTCTTGCTTTCTGGCAGTTAATGAGGATTCACTCAAGAAGTTACCAAGTTGGTTGGACACGCCAAAAGGTCTTTCATTTCATGATTGGGCTCTCTAACTTGGGTTATGTTGTTTATTTCGTATTGACTGTTATTGCCACTTGCAATTCATGGTCATGCTGGTCAAATTCCTGTGGCTTTGTATTCATGGCCTTCCCAAAGATCCTGTTTCTTGCAGCTTTTCTGCTACTTTTGTCATACTGGGCCGATCTCTGCCATCAGGCTGATGATGAAGATGATGAGGGGGAGAGTAGTTCTCGTGAAACTTTATTGGAGAAGTCAAGGAAGCCAGCATCATCAGACATGAGCAATTATCAGCGATGTCTTCCTGTTCCGTCCTGTCATGTTGGAAGTCGCCAAAGATATGTTATTGTAGTCACTGTGGTAATATTTGTTTTGATGATTGTGTTCGCTGTGCTAATTTGGATTGGTCTGGGGAAGAATCCAATTGATTCATCAACTGTTGCCAGGGTATATGTGGATATTTTTGCAATTGGAATTCTTTTGTTAGGAGGAGCCTTAGCAATTTATGGACTCCTAATATATTTGAAGATGAGCAAAGTCAGGTCTGAGGGAGTAACAGAGATGCAGAAGGTCAAAGGTCTTGCTGTTGTTTCTCTTGCATGTTTCACAACAAGTGCTTTGGTAGCTCTTCTCACAGATATTCCGGTTCTTTATCGTTGGCATCAAGAGCATATAAGTGGTGTCAGTACTATGCTCTTACTGTTCCTATACTATTTTATAGGTTCGTCAACACCGTCTGCGTTTGTACTGTGGAATATGAGAGAACTACCACCATCAAGGGCAACAAACAGACATGAAGATTCTAGAATAGTGTTCATAAATGATAGTTCAACAGGGGTACGTGATCCTCAGCGTTGGACAACAGTCACAAGCTTGCAAAATCAGAACTCAAAAGCAAGTCCCATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37804.p1 GENE.S_Transcript_37804~~S_Transcript_37804.p1 ORF type:complete len:353 (+),score=59.23,DUF1084|PF06454.7|2.3e-13,DUF1084|PF06454.7|4.7e-10 S_Transcript_37804:660-1718(+)
MWELRGGTCFPPEIIAVDAALACIDAAIAVLAFWQLMRIHSRSYQVGWTRQKVFHFMIGLSNLGYVVYFVLTVIATCNSWSCWSNSCGFVFMAFPKILFLAAFLLLLSYWADLCHQADDEDDEGESSSRETLLEKSRKPASSDMSNYQRCLPVPSCHVGSRQRYVIVVTVVIFVLMIVFAVLIWIGLGKNPIDSSTVARVYVDIFAIGILLLGGALAIYGLLIYLKMSKVRSEGVTEMQKVKGLAVVSLACFTTSALVALLTDIPVLYRWHQEHISGVSTMLLLFLYYFIGSSTPSAFVLWNMRELPPSRATNRHEDSRIVFINDSSTGVRDPQRWTTVTSLQNQNSKASPI*

Click here to download the sequence:
Link to NCBI Protein BLAST