Transcript Information: S_Transcript_378094.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0378346701653
Replicate 27.3035441293842
Replicate 34.9604600500719
Condition 2: 8 Hour
Replicate 13.0885048045503
Replicate 21.697174724393
Replicate 31.470058455516
Condition 3: 24 Hour
Replicate 18.2859902895357
Replicate 26.0957838032934
Replicate 35.9141345501651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378094.p1 GENE.S_Transcript_378094~~S_Transcript_378094.p1 ORF type:5prime_partial len:145 (-),score=9.97,RVT_1|PF00078.23|4.9e-14 S_Transcript_378094:300-734(-)
CTCTGTAACACCAATTACAAGGTGATTTCCAAGATCCTAGTTAGTAGGATTCGGCCATTTCTGGGAACCCTCATTTCCCCTAACCAAAATAGCTTCATCCCGGGGAGAGGATCGGATATCAATTACATTGTAGCTTCCGAAATCATCCACTCTATGGGTAAAAAGAAAGGGAAAAAGGGTTGGTTTGCTCTTAAAATTGATCTTGAGAAGGCATATGCTAGAATGGAATGGGATTTTATTCGAAATATGCTTTTCTCATTTAACTTTGACCCCCCTCCATTAGACTTATCATGGAATGCATTACTTCTGTCACGACCTAAGTCCTTGTTAATAGAGGTCAAACGGAGGAGTTCCAGCCTTCCCGTGGCCTTAGGCAAGGGGACCCTCTATCGCCTTATATCTTCATTTTGTGCAAGGAATTTCTTTCTAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378094.p1 GENE.S_Transcript_378094~~S_Transcript_378094.p1 ORF type:5prime_partial len:145 (-),score=9.97,RVT_1|PF00078.23|4.9e-14 S_Transcript_378094:300-734(-)
LCNTNYKVISKILVSRIRPFLGTLISPNQNSFIPGRGSDINYIVASEIIHSMGKKKGKKGWFALKIDLEKAYARMEWDFIRNMLFSFNFDPPPLDLSWNALLLSRPKSLLIEVKRRSSSLPVALGKGTLYRLISSFCARNFFLN*

Click here to download the sequence:
Link to NCBI Protein BLAST