Transcript Information: S_Transcript_378130.p1


Annotated TAIR IDAT1G12620.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4294883-4296748 | Reverse length=621
E-Value4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.24755350447786
Condition 2: 8 Hour
Replicate 10.2862468498944
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.29321991262543
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378130.p1 GENE.S_Transcript_378130~~S_Transcript_378130.p1 ORF type:internal len:149 (+),score=31.56,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|1.8e-13,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|3.8e-19,PPR_2|PF13041.2|2.5e-10,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|4.1e-08,PPR_1|PF12854.3|6.7e-10,PPR_1|PF12854.3|3.1e-14,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|4.8e-09,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.0095,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|5.6e-06,MRP-S27|PF10037.5|0.29,MRP-S27|PF10037.5|74,MRP-S27|PF10037.5|1,MRP-S27|PF10037.5|0.061 S_Transcript_378130:3-446(+)
GCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAGCATGCTTGTGGATATGTGTTGCAAAGATGGCAGGGTGGAGGAAGCAGAATCCATAGTCGAATTCATGATTCAGAGAGGTGAGGCTCCAAACATCATTACGTACAGTGCTCACTTGGATGGATATTGTTTACGTGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCATGCTCAAGCGTGGTTTCCATCCTCATGTTGTGACCTTTAACACCTTGATCAATGGGTATGTCAAGGCTAAAATATTCGACAAAGCCGTCAAAATTTTCCAGCAAATGCCTTGTCATGGGATTGTACCTGATGTTGCTACCTACACCACTCTTATAGATGGATTGTGTAAAGCTAGAAAGCTGCAAGCTGCCCGTCAGATCTTTGACGAAATGCAGGTCAATGGAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378130.p1 GENE.S_Transcript_378130~~S_Transcript_378130.p1 ORF type:internal len:149 (+),score=31.56,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|1.8e-13,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|3.8e-19,PPR_2|PF13041.2|2.5e-10,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|4.1e-08,PPR_1|PF12854.3|6.7e-10,PPR_1|PF12854.3|3.1e-14,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|4.8e-09,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.0095,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|5.6e-06,MRP-S27|PF10037.5|0.29,MRP-S27|PF10037.5|74,MRP-S27|PF10037.5|1,MRP-S27|PF10037.5|0.061 S_Transcript_378130:3-446(+)
ADMLESSISPDVQTFSMLVDMCCKDGRVEEAESIVEFMIQRGEAPNIITYSAHLDGYCLRGQMDEASKLLDFMLKRGFHPHVVTFNTLINGYVKAKIFDKAVKIFQQMPCHGIVPDVATYTTLIDGLCKARKLQAARQIFDEMQVNGV

Click here to download the sequence:
Link to NCBI Protein BLAST