Transcript Information: S_Transcript_378132.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value4E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25376009053549
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378132.p1 GENE.S_Transcript_378132~~S_Transcript_378132.p1 ORF type:internal len:84 (+),score=18.19,PPR_2|PF13041.2|4.6e-19,PPR_2|PF13041.2|4.6e-16,PPR_1|PF12854.3|5e-13,PPR_1|PF12854.3|4.6e-13,PPR_1|PF12854.3|0.018,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|1.1e-10,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|6.9e-07 S_Transcript_378132:2-250(+)
AACAACATAGCTCCCGATGTTGAGACTTTCAACACCATGATTGACATGCTCTGTAAAGAAGGAAGGGTGGATGAAGCACATGGCATCCTAGATTACATGCTTGAGAGAGGTGAAACTCCAGACATAATTACTTACAATGCTCTGTTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCGTTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378132.p1 GENE.S_Transcript_378132~~S_Transcript_378132.p1 ORF type:internal len:84 (+),score=18.19,PPR_2|PF13041.2|4.6e-19,PPR_2|PF13041.2|4.6e-16,PPR_1|PF12854.3|5e-13,PPR_1|PF12854.3|4.6e-13,PPR_1|PF12854.3|0.018,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|1.1e-10,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|6.9e-07 S_Transcript_378132:2-250(+)
NNIAPDVETFNTMIDMLCKEGRVDEAHGILDYMLERGETPDIITYNALLDGYCLCGRMDEALQLMDFMVEKGCHPNVVTLNSL

Click here to download the sequence:
Link to NCBI Protein BLAST