Transcript Information: S_Transcript_378134.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.0710092018211
Replicate 30.17905569013204
Condition 2: 8 Hour
Replicate 10.62112787331455
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.66011101678682
Replicate 30.7346226525762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378134.p1 GENE.S_Transcript_378134~~S_Transcript_378134.p1 ORF type:5prime_partial len:103 (+),score=28.04,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|2.3e-14,PPR_2|PF13041.2|2.7e-09,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|9.3e-07,PPR_1|PF12854.3|4e-15,PPR|PF01535.16|5e-08,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.9e-08,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|4e-05 S_Transcript_378134:2-310(+)
GTTGAGACTTTCAGCACCATGATTGACATTCACTGTAAAGAAGGGAGGGTGGATGAAGCACATGACATCCTAGAATACATGCTCGACAAAGGTGAGACTCCAGACATAATTACTTACAGTGCTCCCTTTGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCGTCTCAGCTTATGAATTTCATGGTGGAAAAGGGATGCCAGCCTGATGTTGTGACTTTCAACTCCTTGATCAATGGATATTGCAAGGCTCAAAACATTGATGCAGCTCTCAGCCTGTTTCAAGAAATTTCTCTTGAGGGCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378134.p1 GENE.S_Transcript_378134~~S_Transcript_378134.p1 ORF type:5prime_partial len:103 (+),score=28.04,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|2.3e-14,PPR_2|PF13041.2|2.7e-09,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|9.3e-07,PPR_1|PF12854.3|4e-15,PPR|PF01535.16|5e-08,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.9e-08,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|4e-05 S_Transcript_378134:2-310(+)
VETFSTMIDIHCKEGRVDEAHDILEYMLDKGETPDIITYSAPFDGYCLCGRMDEASQLMNFMVEKGCQPDVVTFNSLINGYCKAQNIDAALSLFQEISLEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST